RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SERPINA12Q8IW75 414 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 SLC38A5Q8WUX1 472 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PLD4Q96BZ4 506 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 SCRN2Q96FV2 425 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 OPALINQ96PE5 141 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 OR2A14Q96R47 310 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 SECISBP2Q96T21 854 aaKnown RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 C1QTNF3Q9BXJ4 246 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ING3Q9NXR8 418 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PCDHGA2Q9Y5H1 932 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ENPP4Q9Y6X5 453 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PLXNA4Q9HCM2 1894 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 FAM172BPA6NC97 362 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PRAMEF25A6NGN4 478 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 INMT-MINDY4F8WBC2 141 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PDPK1O15530 556 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 TGM5O43548 720 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 HRGP04196 525 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PCCBP05166 539 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 CD3GP09693 182 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 IMPA1P29218 277 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 GNG2P59768 71 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 LARS2Q15031 903 aaKnown RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 REEP3Q6NUK4 255 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ZCCHC10Q8TBK6 192 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 MED28Q9H204 178 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 CACYBPQ9HB71 228 aaKnown RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 HHATLQ9HCP6 504 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 MAN2B2Q9Y2E5 1009 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 GBF1Q92538 1859 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 ICMTO60725 284 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 OR5F1O95221 314 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 SLC2A10O95528 541 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 PTPN6P29350 595 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 GRPRP30550 384 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 MAP2K3P46734 347 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 BLVRAP53004 296 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 OC90Q02509 493 aaPredicted RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 RBBP4Q09028 425 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 ANGPT1Q15389 498 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 SMUG1Q53HV7 270 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 MACC1Q6ZN28 852 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 SLC7A13Q8TCU3 470 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 CHAC2Q8WUX2 184 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 RNF121Q9H920 327 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 STMN3Q9NZ72 180 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 ALG5Q9Y673 324 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 IQCMA0A1B0GVH7 501 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 C8AP07357 584 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 HBQ1P09105 142 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 MYOGP15173 224 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 PRKCAP17252 672 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 SLC9A3P48764 834 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 RPA4Q13156 261 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 GPR68Q15743 365 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 SFRP4Q6FHJ7 346 aaPredicted RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 TUBA3EQ6PEY2 450 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 GALNT13Q8IUC8 556 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 PHC2Q8IXK0 858 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 BOLLQ8N9W6 283 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 TXNL4BQ9NX01 149 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 RPL36Q9Y3U8 105 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 CIB4A0PJX0 185 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 FAM170BA6NMN3 283 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 POP4O95707 220 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 AHRP35869 848 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF81P51508 661 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 CDH11P55287 796 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 CXCR4P61073 352 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 POLR2LP62875 67 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 OTPQ5XKR4 325 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 PODNL1Q6PEZ8 512 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 ZC3H14Q6PJT7 736 aaKnown RBP13.8□□□□□ -0.2
PTPN9-201ENST00000306726 UBQLNLQ8IYU4 475 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 OR51A7Q8NH64 312 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 TESCQ96BS2 214 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 C16orf58Q96GQ5 468 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 PSD2Q9BQI7 771 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 NUDT15Q9NV35 164 aa13.8□□□□□ -0.2
PTPN9-201ENST00000306726 PLXNA3P51805 1871 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 APEHP13798 732 aaKnown RBP13.79□□□□□ -0.2
PTPN9-201ENST00000306726 POU3F3P20264 500 aaPredicted RBP13.79□□□□□ -0.2
PTPN9-201ENST00000306726 KIR2DL3P43628 341 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 CRYBA2P53672 197 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 BHLHB9Q6PI77 547 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 ABCG5Q9H222 651 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 PRELID1Q9Y255 219 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 A0A1W2PRG6 482 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 PBX2P40425 430 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 FBXO43Q4G163 708 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
PTPN9-201ENST00000306726 ARHGAP15Q53QZ3 475 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 MZT2BQ6NZ67 158 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 FAM92BQ6ZTR7 304 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF367Q7RTV3 350 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 C17orf64Q86WR6 236 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 KIAA1958Q8N8K9 716 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms