RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 RIN1Q13671 783 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 LRRN1Q6UXK5 716 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 DTWD1Q8N5C7 304 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ELP5Q8TE02 316 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 SCRN2Q96FV2 425 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ZNF701Q9NV72 531 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 GPR52Q9Y2T5 361 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CLEC3AO75596 197 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CARD17Q5XLA6 110 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 NCCRP1Q6ZVX7 275 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 KLHDC8AQ8IYD2 350 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 SLC2A11Q9BYW1 496 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ANKRD60Q9BZ19 345 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 DZANK1Q9NVP4 752 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 FBP2O00757 339 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 RFPL2O75678 378 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 UGT2B10P36537 528 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 RGNQ15493 299 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 LRFN4Q6PJG9 635 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 BAIAP2L2Q6UXY1 529 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CHST14Q8NCH0 376 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 OR1A2Q9Y585 309 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 OR5K4A6NMS3 321 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 CMPK2Q5EBM0 449 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.28
PRKCB-201ENST00000303531 SHFQ7M4L6 423 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 NAGSQ8N159 534 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 OR13J1Q8NGT2 312 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 RHBDF1Q96CC6 855 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 ZNF717Q9BY31 904 aaPredicted RBP13.27□□□□□ -0.28
PRKCB-201ENST00000303531 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 PRKYO43930 277 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 SFTPBP07988 381 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 UNC5DQ6UXZ4 953 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 OR52E2Q8NGJ4 325 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 FIBINQ8TAL6 211 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 TSACCQ96A04 125 aaPredicted RBP13.27□□□□□ -0.28
PRKCB-201ENST00000303531 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.28
PRKCB-201ENST00000303531 FBLP22087 321 aaKnown RBP13.27□□□□□ -0.28
PRKCB-201ENST00000303531 CAPZA1P52907 286 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 SIM1P81133 766 aaPredicted RBP13.27□□□□□ -0.28
PRKCB-201ENST00000303531 GSTM4Q03013 218 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 IQCF1Q8N6M8 205 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 PDE7BQ9NP56 450 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 C5AR2Q9P296 337 aa13.27□□□□□ -0.28
PRKCB-201ENST00000303531 A0A0U1RQS6 177 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 M0QZQ0 153 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 AK1P00568 194 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 PENKP01210 267 aaPredicted RBP13.27□□□□□ -0.29
PRKCB-201ENST00000303531 PET100P0DJ07 73 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 DNASE1P24855 282 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 NOVP48745 357 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 TMEM25Q86YD3 366 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 SLC15A4Q8N697 577 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 TMEM246Q9BRR3 403 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 AFF1P51825 1210 aaKnown RBP13.27□□□□□ -0.29
PRKCB-201ENST00000303531 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.29
PRKCB-201ENST00000303531 APOFQ13790 326 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 PLBD1Q6P4A8 553 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 BORCS8Q96FH0 119 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 MAELQ96JY0 434 aaKnown RBP13.27□□□□□ -0.29
PRKCB-201ENST00000303531 MRPL15Q9P015 296 aaKnown RBP13.27□□□□□ -0.29
PRKCB-201ENST00000303531 MGAT4CQ9UBM8 478 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 WASF3Q9UPY6 502 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 FGF4P08620 206 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 EIF4HQ15056 248 aaKnown RBP13.27□□□□□ -0.29
PRKCB-201ENST00000303531 CDK10Q15131 360 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 CD300LFQ8TDQ1 290 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 MR1Q95460 341 aa13.27□□□□□ -0.29
PRKCB-201ENST00000303531 KLHL33A6NCF5 533 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 FARS2O95363 451 aaKnown RBP13.26□□□□□ -0.29
PRKCB-201ENST00000303531 NTRK2Q16620 822 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 CDNFQ49AH0 187 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 DCDC5Q6ZRR9 648 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ZSCAN4Q8NAM6 433 aaPredicted RBP13.26□□□□□ -0.29
PRKCB-201ENST00000303531 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 NUFIP1Q9UHK0 495 aaKnown RBP13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ENPP4Q9Y6X5 453 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 TP53I11O14683 189 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 RGS19P49795 217 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 NDUFAF5Q5TEU4 345 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 BEND4Q6ZU67 534 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 SCD5Q86SK9 330 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ARFGAP1Q8N6T3 406 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF559Q9BR84 538 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 PPP4R1LQ9P1A2 415 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 GPR34Q9UPC5 381 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 RETP07949 1114 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF791Q3KP31 576 aaPredicted RBP13.26□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF542PQ5EBM4 170 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 NRMQ8IXM6 262 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 OR9Q2Q8NGE9 314 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
PRKCB-201ENST00000303531 GPR150Q8NGU9 434 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms