RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CHMP24386 653 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 NDUFS1P28331 727 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 GGT2P36268 569 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 EIF2B5Q13144 721 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 TRMT12Q53H54 448 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 COLEC12Q5KU26 742 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 ZC3H14Q6PJT7 736 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 METTL27Q8N6F8 245 aaPredicted RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 MUL1Q969V5 352 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 CES1P1Q9UKY3 287 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 POFUT2Q9Y2G5 429 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 CPSF4LA6NMK7 179 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 J3QRK9 145 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 SEC16AO15027 2179 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 BCL10O95999 233 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 H1F0P07305 194 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 TTKP33981 857 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 KHKP50053 298 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 SHC2P98077 582 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 GAS6Q14393 721 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 MLIPQ5VWP3 458 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 KRT73Q86Y46 540 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 TMEM52Q8NDY8 209 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 FLVCR1-AS1Q8TAF5 88 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 GAB3Q8WWW8 586 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 ZNF354BQ96LW1 612 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 FOXQ1Q9C009 403 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 POLMQ9NP87 494 aaPredicted RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 SGK494L7N484 410 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 UGT2B17O75795 530 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 ELAVL4P26378 380 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 MLLT10P55197 1068 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 NUP107P57740 925 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 GABARAPL2P60520 117 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 HHEXQ03014 270 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 DENND6BQ8NEG7 585 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 TANKQ92844 425 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 CCDC3Q9BQI4 270 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 FNDC11Q9BVV2 318 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 DUSP21Q9H596 190 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 FAM60AQ9NP50 221 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 MS4A12Q9NXJ0 267 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 TAS2R7Q9NYW3 318 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 WBP11Q9Y2W2 641 aaKnown RBP13.7□□□□□ -0.22
SMG8-201ENST00000300917 WDFY4Q6ZS81 3184 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 EPPINO95925 133 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 NCS1P62166 190 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 TGM3Q08188 693 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
SMG8-201ENST00000300917 FZD2Q14332 565 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 PROX2Q3B8N5 592 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 PTCHD4Q6ZW05 846 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 TSTD1Q8NFU3 115 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 ADAMTS15Q8TE58 950 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 CDS1Q92903 461 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 GAL3ST3Q96A11 431 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 SLC22A18Q96BI1 424 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
SMG8-201ENST00000300917 GIN1Q9NXP7 522 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 EHD3Q9NZN3 535 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 DNAJC27Q9NZQ0 273 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 OR2A25A4D2G3 310 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 PRAMEF26H0Y7S4 382 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 PDE9AO76083 593 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 APOL3O95236 402 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 FHP07954 510 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 JUNDP17535 347 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 DDX5P17844 614 aaKnown RBP13.69□□□□□ -0.22
SMG8-201ENST00000300917 TRA2BP62995 288 aaKnown RBP13.69□□□□□ -0.22
SMG8-201ENST00000300917 PRR5P85299 388 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 ZNF311Q5JNZ3 666 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 IQCHQ86VS3 1027 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 NDNFQ8TB73 568 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 HSPBAP1Q96EW2 488 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 GABARAPL3Q9BY60 117 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 IL20RAQ9UHF4 553 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 PSME2Q9UL46 239 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 NAALAD2Q9Y3Q0 740 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 ASXL3Q9C0F0 2248 aa13.69□□□□□ -0.22
SMG8-201ENST00000300917 TBX19O60806 448 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 JUNBP17275 347 aaPredicted RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 CBLP22681 906 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 PDX1P52945 283 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 MAP4K2Q12851 820 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 KIR2DS3Q14952 304 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 EXOSC7Q15024 291 aaKnown RBP13.68□□□□□ -0.22
SMG8-201ENST00000300917 GPR68Q15743 365 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 PODNL1Q6PEZ8 512 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 SLC16A12Q6ZSM3 486 aa13.68□□□□□ -0.22
SMG8-201ENST00000300917 STX19Q8N4C7 294 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms