RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ASF1AQ9Y294 204 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 DNAH14Q0VDD8 3507 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 PCM1Q15154 2024 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 A0A1W2PRQ8 180 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 OR10H3O60404 316 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 GPX5O75715 221 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 UGT2B17O75795 530 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 APODP05090 189 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 POU1F1P28069 291 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 GTF2E2P29084 291 aaKnown RBP12.2□□□□□ -0.46
C9orf3-201ENST00000277198 WASP42768 502 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 PCYT1AP49585 367 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 RORCP51449 518 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 XKP51811 444 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 MEF2AQ02078 507 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-201ENST00000277198 MLLT11Q13015 90 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-201ENST00000277198 TMEM52BQ4KMG9 183 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 GDPD3Q7L5L3 318 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 C6orf120Q7Z4R8 191 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 FAM26EQ8N5C1 309 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 NANOGP1Q8N7R0 232 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 SPATA5L1Q9BVQ7 753 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
C9orf3-201ENST00000277198 MTG2Q9H4K7 406 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 NDUFB11Q9NX14 153 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 DEC1Q9P2X7 70 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 STUB1Q9UNE7 303 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 GRIP1Q9Y3R0 1128 aa12.2□□□□□ -0.46
C9orf3-201ENST00000277198 DNMT3AQ9Y6K1 912 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-201ENST00000277198 IQCMA0A1B0GVH7 501 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TBC1D3BA6NDS4 549 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ZNF670-ZNF695F2Z2N8 137 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 KLF8O95600 359 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TBX6O95947 436 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 C6P13671 934 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 NFE2L1Q14494 772 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 POM121L1PQ3SYA9 428 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 PGBD2Q6P3X8 592 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ERN2Q76MJ5 926 aaKnown RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 NUDT13Q86X67 352 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 OR8D1Q8WZ84 308 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ASPNQ9BXN1 380 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 POLDIP3Q9BY77 421 aaKnown RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SLAMF7Q9NQ25 335 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SIRT3Q9NTG7 399 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TAS2R16Q9NYV7 291 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 P2RX2Q9UBL9 471 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 EDDM13A0A1B0GTR0 161 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 HYKKA2RU49 373 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 K7ESM1 405 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 M0R129 80 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 HMGN4O00479 90 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 LZTS3O60299 673 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 LGI1O95970 557 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ADRA2AP08913 450 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 DRD2P14416 443 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TNFSF8P32971 234 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 CCR8P51685 355 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 REEP5Q00765 189 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 RUNX1T1Q06455 604 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 GNA13Q14344 377 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SEC23BQ15437 767 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 AGAP6Q5VW22 663 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TNFAIP8L2Q6P589 184 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ZC3H14Q6PJT7 736 aaKnown RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SYT13Q7L8C5 426 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 AMZ2Q86W34 360 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TBC1D19Q8N5T2 526 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 OR5K2Q8NHB8 316 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 TFGQ92734 400 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 AGAP4Q96P64 663 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 IL4I1Q96RQ9 567 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SDHCQ99643 169 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 ROGDIQ9GZN7 287 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SMURF1Q9HCE7 757 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SEMA3GQ9NS98 782 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 SEC14L3Q9UDX4 400 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 DIMT1Q9UNQ2 313 aaKnown RBP12.19□□□□□ -0.46
C9orf3-201ENST00000277198 PCDHGB2Q9Y5G2 931 aa12.19□□□□□ -0.46
C9orf3-201ENST00000277198 H3BN98 237 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SH3BP5O60239 455 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SEMA7AO75326 666 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CSO75390 466 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ACADMP11310 421 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ADRB3P13945 408 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 FUT4P22083 530 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 PPP2R1BP30154 601 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CASP3P42574 277 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CRYBB2P43320 205 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ANXA11P50995 505 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms