RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GPR32P1Q8NGA4 272 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 OR5M3Q8NGP4 307 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 SLC7A13Q8TCU3 470 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 ADAMTS19Q8TE59 1207 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 SLC38A5Q8WUX1 472 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 NEURL3Q96EH8 262 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 ZNF578Q96N58 590 aaPredicted RBP11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 TEX12Q9BXU0 123 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 BTBD1Q9H0C5 482 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 OR51J1Q9H342 316 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 CYSLTR2Q9NS75 346 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 CACNG2Q9Y698 323 aa11.73□□□□□ -0.53
CHMP2B-201ENST00000263780 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 GABRPO00591 440 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RRASP10301 218 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RBMS1P29558 406 aaKnown RBP11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ACSL1P33121 698 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 IFNGR2P38484 337 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RFX3P48380 749 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 AGFG1P52594 562 aaKnown RBP11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RAG2P55895 527 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 MC1RQ01726 317 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TAP2Q03519 686 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 CCL14Q16627 93 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 MPEG1Q2M385 716 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 SYTL3Q4VX76 610 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 BRAT1Q6PJG6 821 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 KLHL36Q8N4N3 616 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TEX47Q8TBZ9 253 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 OR5P2Q8WZ92 322 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 NXPE2Q96DL1 559 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TMEM19Q96HH6 336 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 SENP5Q96HI0 755 aaPredicted RBP11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 OR4K3Q96R72 315 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 FBXW2Q9UKT8 454 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 MAB21L2Q9Y586 359 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 SLC28A2O43868 658 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 MMP20O60882 483 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 SCO1O75880 301 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ATF4P18848 351 aaPredicted RBP11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 AHCYP23526 432 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 MTNR1BP49286 362 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 CCT3P49368 545 aaKnown RBP11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 PTSQ03393 145 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RPA4Q13156 261 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 POU4F3Q15319 338 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 NTRK2Q16620 822 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 FAM26DQ5JW98 314 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 GARNL3Q5VVW2 1013 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RAET1GQ6H3X3 334 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ACSM5Q6NUN0 579 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 PODNL1Q6PEZ8 512 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 OTOP2Q7RTS6 562 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 PRSS42Q7Z5A4 293 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ABI3BPQ7Z7G0 1075 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 RAET1EQ8TD07 263 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 FGF11Q92914 225 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TIFAQ96CG3 184 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TMED9Q9BVK6 235 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 TBC1D17Q9HA65 648 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ZC4H2Q9NQZ6 224 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 SEC14L3Q9UDX4 400 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 DYRK1BQ9Y463 629 aa11.72□□□□□ -0.53
CHMP2B-201ENST00000263780 ANKDD1BA6NHY2 528 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 FAM170BA6NMN3 283 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 CASC3O15234 703 aaKnown RBP11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 LIMS3P0CW19 117 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 LIMS4P0CW20 117 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 ELK1P19419 428 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 GKP32189 559 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 SLC1A3P43003 542 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 PITPNBP48739 271 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 SPINT3P49223 89 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 SNRPD1P62314 119 aaKnown RBP11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 LRRC32Q14392 662 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 RPS26P11Q5JNZ5 115 aaPredicted RBP11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 SLC27A4Q6P1M0 643 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 C1orf94Q6P1W5 598 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 TMPRSS11BQ86T26 416 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 DBF4BQ8NFT6 615 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 OR4K5Q8NGD3 323 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 OR2AP1Q8NGE2 309 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 OR8K5Q8NH50 307 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 OR52N1Q8NH53 320 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 TMEM159Q96B96 161 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 DPCDQ9BVM2 203 aaPredicted RBP11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 GPR62Q9BZJ7 368 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 DMRT3Q9NQL9 472 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 ENAMQ9NRM1 1142 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 LYARQ9NX58 379 aaKnown RBP11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
CHMP2B-201ENST00000263780 KDM4EB2RXH2 506 aaPredicted RBP11.71□□□□□ -0.54
CHMP2B-201ENST00000263780 IFNA16P05015 189 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms