RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FUT1P19526 365 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 GPR4P46093 362 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 LIMK1P53667 647 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 DUSP2Q05923 314 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 GPR50Q13585 617 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 UNC5DQ6UXZ4 953 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CCDC80Q76M96 950 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 RASGRP3Q8IV61 690 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 SHISA5Q8N114 240 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 NANOGP1Q8N7R0 232 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 RNFT2Q96EX2 444 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 ST6GAL2Q96JF0 529 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 FCRL4Q96PJ5 515 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 BBS4Q96RK4 519 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 DPH7Q9BTV6 452 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 ZNF717Q9BY31 904 aaPredicted RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 TTTY10Q9BZA0 68 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CAPN10Q9HC96 672 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 SIRT3Q9NTG7 399 aaPredicted RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 CNOT2Q9NZN8 540 aaKnown RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 A4GNTQ9UNA3 340 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 TRBV23OR9-2A0A075B6M9 112 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 OR52A4PA6NMU1 304 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 PI15O43692 258 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 DPM1O60762 260 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CPNE3O75131 537 aaKnown RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 MOSPD3O75425 235 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CXCL10P02778 98 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 RB1P06400 928 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CSF3P09919 207 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 EPCAMP16422 314 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 LAG3P18627 525 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 MYL12AP19105 171 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CELP19835 753 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 BSGP35613 385 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 GIPRP48546 466 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 ILKQ13418 452 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 DHCR24Q15392 516 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 Q5BKY6 102 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 NDUFAF5Q5TEU4 345 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 SMARCD3Q6STE5 483 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 IL20RBQ6UXL0 311 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 VRK2Q86Y07 508 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 KRT73Q86Y46 540 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 LRRC56Q8IYG6 542 aaPredicted RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 KRT78Q8N1N4 520 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 SIMC1Q8NDZ2 872 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 BBS1Q8NFJ9 593 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 OR8J1Q8NGP2 316 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 EFHD2Q96C19 240 aaPredicted RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 NEURL3Q96EH8 262 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 ZNF354BQ96LW1 612 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 ZNF582Q96NG8 517 aaPredicted RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 TEFMQ96QE5 360 aaKnown RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 SRRQ9GZT4 340 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 GLIPR2Q9H4G4 154 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 LHX9Q9NQ69 397 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 HCN2Q9UL51 889 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 NDRG2Q9UN36 371 aaKnown RBP8.62□□□□□ -1.03
MSH4-201ENST00000263187 KCNK6Q9Y257 313 aa8.62□□□□□ -1.03
MSH4-201ENST00000263187 ALPK3Q96L96 1907 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 ZNF670-ZNF695F2Z2N8 137 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 TSC22D2O75157 780 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 PCDH8O95206 1070 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 CHRM4P08173 479 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 ACP5P13686 325 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 KCNJ5P48544 419 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 DCDC1P59894 354 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 PIP5KL1Q5T9C9 394 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 MFSD4BQ5TF39 518 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 SAXO2Q658L1 398 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 PRICKLE2Q7Z3G6 844 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 KIF18BQ86Y91 864 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 APOBEC4Q8WW27 367 aaKnown RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 TMCO6Q96DC7 493 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 SLC35G5Q96KT7 338 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 ZNF607Q96SK3 696 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 C6orf106Q9H6K1 298 aaPredicted RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 SEC14L4Q9UDX3 406 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 CSNK1G3Q9Y6M4 447 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 A0A0B4J293 547 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 OR6C70A6NIJ9 312 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 MPZL2O60487 215 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 HMGN2P05204 90 aaKnown RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 ADH1AP07327 375 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 SOX9P48436 509 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 PXNP49023 591 aaPredicted RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 TAS2R41P59536 307 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 FABP5Q01469 135 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 HYAL2Q12891 473 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 CAMK1Q14012 370 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 IL18Q14116 193 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 SLC35F1Q5T1Q4 408 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 C18orf63Q68DL7 685 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 SYCE2Q6PIF2 218 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 FBXO46Q6PJ61 603 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms