RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CACNG3O60359 315 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 RPSAP08865 295 aaKnown RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 ABHD2P08910 425 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 POLR2MP0CAP2 368 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 GALP22466 123 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 FCARP24071 287 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 NF2P35240 595 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 ZFP36L2P47974 494 aaKnown RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 VCPP55072 806 aaKnown RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 IL24Q13007 206 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 GCKRQ14397 625 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 OR1C1Q15619 314 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 RFTN2Q52LD8 501 aaPredicted RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 CAPN13Q6MZZ7 669 aaPredicted RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 DOK6Q6PKX4 331 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 ISLR2Q6UXK2 745 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 VASH2Q86V25 355 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 STHQ8IWL8 128 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 TRIML2Q8N7C3 387 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 OR6F1Q8NGZ6 308 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 OR8K3Q8NH51 312 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 AGR3Q8TD06 166 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 SSC4DQ8WTU2 575 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 CDKL2Q92772 493 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 C11orf24Q96F05 449 aaPredicted RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 CCDC77Q9BR77 488 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 UQCC2Q9BRT2 126 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 CABLES2Q9BTV7 478 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 TRIM15Q9C019 465 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 TMEM245Q9H330 911 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 TMEM165Q9HC07 324 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 PLEK2Q9NYT0 353 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 BAIAP2L1Q9UHR4 511 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 PRELID1Q9Y255 219 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 EXOC6BQ9Y2D4 811 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 STRAPQ9Y3F4 350 aaKnown RBP3.64□□□□□ -1.83
CCDC54-201ENST00000261058 OR1A2Q9Y585 309 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 MAB21L2Q9Y586 359 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 SMARCA2P51531 1590 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 KIF7Q2M1P5 1343 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 IGKV3D-15A0A087WSY6 115 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 TRBV5-4A0A0C4DH59 114 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 ARHGEF33A8MVX0 844 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 E9PBE3 544 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 F8WDY8 70 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 H0Y8G0 127 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 K7EQG2 157 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 E2F3O00716 465 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 CETN3O15182 167 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 PSMD3O43242 534 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 SSX5O60225 188 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 AKR7A3O95154 331 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 CXCL14O95715 111 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 MT-ATP6P00846 226 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 TGFAP01135 160 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 S100A9P06702 114 aaKnown RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 TPM1P09493 284 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 THRBP10828 461 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 NCF1P14598 390 aaPredicted RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 AREGP15514 252 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 CHRNA3P32297 505 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 MNAT1P51948 309 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 HAND2P61296 217 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 FKBP3Q00688 224 aaKnown RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 SPIBQ01892 262 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 HSPA14Q0VDF9 509 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 GIT2Q14161 759 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF146Q15072 292 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 KNOP1Q1ED39 458 aaKnown RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 MS4A18Q3C1V0 323 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 EPC2Q52LR7 807 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 FAM182AQ5T1J6 154 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 NEPROQ6NW34 567 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 B3GLCTQ6Y288 498 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 SPATA24Q86W54 205 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 FAM131BQ86XD5 332 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 BBS5Q8N3I7 341 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 NEK11Q8NG66 645 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 OR52B6Q8NGF0 335 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 SPPL2AQ8TCT8 520 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 ST7LQ8TDW4 575 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 SLC45A3Q96JT2 553 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 ALKBH3Q96Q83 286 aaPredicted RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 PLIN2Q99541 437 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 GAL3ST1Q99999 423 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 LRRC61Q9BV99 259 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 ECT2Q9H8V3 914 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 NGBQ9NPG2 151 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 HOMER3Q9NSC5 361 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 MED17Q9NVC6 651 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 CTSZQ9UBR2 303 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 TRMT6Q9UJA5 497 aaKnown RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 PLEKHA6Q9Y2H5 1048 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 MRPS7Q9Y2R9 242 aaKnown RBP3.63□□□□□ -1.83
CCDC54-201ENST00000261058 FGD5Q6ZNL6 1462 aa3.63□□□□□ -1.83
CCDC54-201ENST00000261058 UBE4BO95155 1302 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 TTC41PQ6P2S7 1318 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms