RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NTSP30990 170 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 MPIP34949 423 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 SOX18P35713 384 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 ASMTP46597 345 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 SLC18A1P54219 525 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 PER3P56645 1201 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 KCNK10P57789 538 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 GPR85P60893 370 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 DCAF7P61962 342 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 SRSF11Q05519 484 aaKnown RBP11.78□□□□□ -0.52
VPREB3-201ENST00000248948 C2orf80Q0P641 193 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 DUSP8Q13202 625 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 TBCELQ5QJ74 424 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 TICAM1Q8IUC6 712 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 GHDCQ8N2G8 530 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 OR9A2Q8NGT5 310 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 AGR3Q8TD06 166 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 MAGED4Q96JG8 741 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 SECISBP2Q96T21 854 aaKnown RBP11.78□□□□□ -0.52
VPREB3-201ENST00000248948 ITPAQ9BY32 194 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 DEPPQ9NTK1 212 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 CNIH4Q9P003 139 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 ERRFI1Q9UJM3 462 aaPredicted RBP11.78□□□□□ -0.52
VPREB3-201ENST00000248948 OSGIN2Q9Y236 505 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 CHCHD2Q9Y6H1 151 aaPredicted RBP11.78□□□□□ -0.52
VPREB3-201ENST00000248948 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
VPREB3-201ENST00000248948 NCOA6Q14686 2063 aaPredicted RBP11.77□□□□□ -0.52
VPREB3-201ENST00000248948 MYO1GB0I1T2 1018 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 NPIPA5E9PKD4 350 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 PLOD3O60568 738 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 SLC19A2O60779 497 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 COQ9O75208 318 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 HSPA4LO95757 839 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 LDLRP01130 860 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 LINC00032P0C843 101 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 CCL3P10147 92 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 NAGAP17050 411 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 DDX5P17844 614 aaKnown RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 CNR1P21554 472 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 NR0B1P51843 470 aaKnown RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 RPP38P78345 283 aaKnown RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 MRPS35P82673 323 aaKnown RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 PDE7AQ13946 482 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 EXOSC7Q15024 291 aaKnown RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 CHI3L2Q15782 390 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 HYAL4Q2M3T9 481 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 ATP6AP1LQ52LC2 224 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 RNFT1Q5M7Z0 435 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 SLC22A10Q63ZE4 541 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 FAM180BQ6P0A1 224 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 FAM111BQ6SJ93 734 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 FAM47EQ6ZV65 393 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 ADCY4Q8NFM4 1077 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 OR52R1Q8NGF1 315 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 MTERF3Q96E29 417 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 HSPBAP1Q96EW2 488 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 BTBD9Q96Q07 612 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 BBS4Q96RK4 519 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 TSPAN10Q9H1Z9 355 aaPredicted RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 IL1RL2Q9HB29 575 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 BCAP29Q9UHQ4 241 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 HAO1Q9UJM8 370 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 NPIPA1Q9UND3 350 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 EXO1Q9UQ84 846 aaKnown RBP11.77□□□□□ -0.53
VPREB3-201ENST00000248948 DTX4Q9Y2E6 619 aa11.77□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF407Q9C0G0 2248 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 A0A087WV62 115 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 A0A0G2JMM0 328 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 A0A1W2PPB8 328 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 A0A1W2PRS3 328 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM120BA0PK00 339 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 PINLYPA6NC86 204 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ANKRD33BA6NCL7 494 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 WIPF3A6NGB9 483 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 FRG2CA6NGY1 282 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 KIR3DP1A8MWS1 328 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TP53I11O14683 189 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TO15178 435 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ASNA1O43681 348 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 SKAP2O75563 359 aaPredicted RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TACR1P25103 407 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ABCD3P28288 659 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 PTGER1P34995 402 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 HPCAL1P37235 193 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 RPL3P39023 403 aaKnown RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 CA7P43166 264 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 EMDP50402 254 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 NCBP2P52298 156 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 CASP6P55212 293 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ABCE1P61221 599 aaKnown RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 CASP8Q14790 479 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 RFTN2Q52LD8 501 aaPredicted RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TRMT12Q53H54 448 aaKnown RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 CMPK2Q5EBM0 449 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms