RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DEF8Q6ZN54 512 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 SPEM1Q8N4L4 309 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 C19orf47Q8N9M1 422 aaKnown RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 OR9Q2Q8NGE9 314 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 VANGL1Q8TAA9 524 aaPredicted RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 LMX1AQ8TE12 382 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 ADAMTS15Q8TE58 950 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 COL26A1Q96A83 441 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 NIPSNAP1Q9BPW8 284 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 PINK1Q9BXM7 581 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 TRIM45Q9H8W5 580 aaPredicted RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 CCNB1IP1Q9NPC3 277 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 EQTNQ9NQ60 294 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 PCDHGA6Q9Y5G7 932 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 H1F0P07305 194 aaKnown RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 ST6GAL1P15907 406 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 SLC5A2P31639 672 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 PPP1CAP62136 330 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 ROR2Q01974 943 aaKnown RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 C16orf62Q7Z3J2 963 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 OR2L13Q8N349 312 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 SDR16C5Q8N3Y7 309 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 ARL14Q8N4G2 192 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 OR13F1Q8NGS4 319 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 ISOC1Q96CN7 298 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 GIMAP5Q96F15 307 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 OTUB1Q96FW1 271 aaPredicted RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 MPP4Q96JB8 637 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 GIN1Q9NXP7 522 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 RHCGQ9UBD6 479 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 MRPS2Q9Y399 296 aaKnown RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 LILRA5A6NI73 299 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 PTGES3LE9PB15 166 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 DCKP27707 260 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 MAZP56270 477 aaKnown RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 FGD3Q5JSP0 725 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 DCST1Q5T197 706 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 XAF1Q6GPH4 301 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 CDC73Q6P1J9 531 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 ZNF438Q7Z4V0 828 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 ERI1Q8IV48 349 aaKnown RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 DEPDC4Q8N2C3 294 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 AQP11Q8NBQ7 271 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 TANKQ92844 425 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 SPACA7Q96KW9 195 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 RSPO3Q9BXY4 272 aaPredicted RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 PCDHGB1Q9Y5G3 927 aa21.84■■□□□ 1.09
MSX2-201ENST00000239243 TDRD6O60522 2096 aaKnown RBP21.84■■□□□ 1.09
MSX2-201ENST00000239243 ZNF860A6NHJ4 632 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 FAAHO00519 579 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 TRMUO75648 421 aaKnown RBP21.83■■□□□ 1.09
MSX2-201ENST00000239243 LGI1O95970 557 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 ADAP00813 363 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 HTR1AP08908 422 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 FMO3P31513 532 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 OLR1P78380 273 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 HPCAP84074 193 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 FAM214AQ32MH5 1076 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 MFSD12Q6NUT3 480 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 SIX5Q8N196 739 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 OR7G2Q8NG99 324 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 DUSP21Q9H596 190 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 TMEM9Q9P0T7 183 aa21.83■■□□□ 1.09
MSX2-201ENST00000239243 SYT5O00445 386 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 XPNPEP2O43895 674 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 NOL3O60936 208 aaKnown RBP21.83■■□□□ 1.08
MSX2-201ENST00000239243 UGT2B17O75795 530 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 IFI6P09912 130 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 CAPZBP47756 277 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 HNRNPKP61978 463 aaKnown RBP eCLIP21.83■■□□□ 1.08
MSX2-201ENST00000239243 SKP1P63208 163 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 CCDC71Q8IV32 467 aaPredicted RBP21.83■■□□□ 1.08
MSX2-201ENST00000239243 ENTHD1Q8IYW4 607 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 ANKHQ9HCJ1 492 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 MGAT4BQ9UQ53 548 aa21.83■■□□□ 1.08
MSX2-201ENST00000239243 DSPPQ9NZW4 1301 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 SRPX2O60687 465 aaPredicted RBP21.82■■□□□ 1.08
MSX2-201ENST00000239243 SEC14L2O76054 403 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 ATP1B1P05026 303 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 ELAVL4P26378 380 aaKnown RBP21.82■■□□□ 1.08
MSX2-201ENST00000239243 SLC35A2P78381 396 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 TEKQ02763 1124 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 ZNF770Q6IQ21 691 aaPredicted RBP21.82■■□□□ 1.08
MSX2-201ENST00000239243 FAM111BQ6SJ93 734 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 SLC36A4Q6YBV0 504 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 P3H2Q8IVL5 708 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 IPCEF1Q8WWN9 437 aaPredicted RBP21.82■■□□□ 1.08
MSX2-201ENST00000239243 NR4A3Q92570 626 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 MIR1-1HGQ9H1L0 117 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 SLC38A1Q9H2H9 487 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 IL21RQ9HBE5 538 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 CYR61O00622 381 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 ALPPP05187 535 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 ITIH1P19827 911 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 MAOBP27338 520 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 MAPK10P53779 464 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 C6orf132Q5T0Z8 1188 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 HEPHL1Q6MZM0 1159 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 NIPAL1Q6NVV3 410 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms