RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PIP5K1AQ99755 562 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 LINC00597Q9H2U6 94 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 B3GNT2Q9NY97 397 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF624Q9P2J8 865 aaPredicted RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC5A10A0PJK1 596 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 TRIM77I1YAP6 450 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 ENTPD6O75354 484 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 CATP04040 527 aaKnown RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 PRKAR1AP10644 381 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 HOXD10P28358 340 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 LIMS1P48059 325 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 FCN2Q15485 313 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 C6orf132Q5T0Z8 1188 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 HENMT1Q5T8I9 393 aaKnown RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 C22orf42Q6IC83 251 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 MZT2BQ6NZ67 158 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 CREB3L2Q70SY1 520 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 RBM45Q8IUH3 476 aaKnown RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 GOT1L1Q8NHS2 421 aaPredicted RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 C16orf78Q8WTQ4 265 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 PPCDCQ96CD2 204 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 RBCK1Q9BYM8 510 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 BHLHE41Q9C0J9 482 aaPredicted RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 ABCG4Q9H172 646 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 FTSJ1Q9UET6 329 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC25A13Q9UJS0 675 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 CMAHPQ9Y471 501 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC35F4A4IF30 521 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 H0YC42 278 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 UGT2B17O75795 530 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CTSLP07711 333 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 HSD3B1P14060 373 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 PSMA1P25786 263 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 HSD3B2P26439 372 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CCR2P41597 374 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 ETV1P50549 477 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CRISP1P54107 249 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CDC42P60953 191 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 GRIN2CQ14957 1233 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 SEC23BQ15437 767 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 FBXO43Q4G163 708 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 NDUFAF5Q5TEU4 345 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 SAXO2Q658L1 398 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 PAQR6Q6TCH4 344 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 METTL3Q86U44 580 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 LSRQ86X29 649 aaPredicted RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 Q8N402 240 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CELF5Q8N6W0 485 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 BTN2A2Q8WVV5 523 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 TOE1Q96GM8 510 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM80Q96HE8 168 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 BARHL1Q9BZE3 327 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC6A16Q9GZN6 736 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 THSD1Q9NS62 852 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 HCFC1R1Q9NWW0 138 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 DNAJC27Q9NZQ0 273 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 C5AR2Q9P296 337 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 YARS2Q9Y2Z4 477 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 KLK4Q9Y5K2 254 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 DENND4CQ5VZ89 1909 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 ORC5O43913 435 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 GPR37L1O60883 481 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CCNB2O95067 398 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CYP17A1P05093 508 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 IL3P08700 152 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 TIMP2P16035 220 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 VIPR1P32241 457 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CSTF2P33240 577 aaKnown RBP eCLIP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 NUP62P37198 522 aaPredicted RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 GDI2P50395 445 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 EPHA5P54756 1037 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 VSX2P58304 361 aaPredicted RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 DCDC1P59894 354 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 POLR2LP62875 67 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC7A9P82251 487 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 DEFA5Q01523 94 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF33BQ06732 778 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 LRRC74AQ0VAA2 488 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 AANATQ16613 207 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZBTB37Q5TC79 503 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZDHHC20Q5W0Z9 365 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 PRSS42Q7Z5A4 293 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 CFAP206Q8IYR0 622 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC39A11Q8N1S5 342 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 LHFPL5Q8TAF8 219 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 SMG7Q92540 1137 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 OPALINQ96PE5 141 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 POLR2J2Q9GZM3 115 aaKnown RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 KCNN2Q9H2S1 579 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 PPA2Q9H2U2 334 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 HHATLQ9HCP6 504 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 A3GALT2U3KPV4 340 aa8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 TNRC18O15417 2968 aaPredicted RBP8.9□□□□□ -0.98
HLA-DOA-201ENST00000229829 A0A1W2PRB8 838 aa8.9□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZAR1LA6NP61 321 aa8.9□□□□□ -0.99
HLA-DOA-201ENST00000229829 RFXAPO00287 272 aa8.9□□□□□ -0.99
HLA-DOA-201ENST00000229829 RTCAO00442 366 aaKnown RBP8.9□□□□□ -0.99
HLA-DOA-201ENST00000229829 GRM6O15303 877 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms