RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 MORN4Q8NDC4 146 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 TM4SF18Q96CE8 201 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 FOPNLQ96NB1 174 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 ATF6BQ99941 703 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 ZSCAN5AQ9BUG6 496 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 TMED9Q9BVK6 235 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 SLC46A2Q9BY10 475 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 QRSL1Q9H0R6 528 aaKnown RBP11.71□□□□□ -0.53
NUP88-201ENST00000225696 RBFOX1Q9NWB1 397 aaKnown RBP11.71□□□□□ -0.53
NUP88-201ENST00000225696 ICKQ9UPZ9 632 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 PRKAB1Q9Y478 270 aa11.71□□□□□ -0.53
NUP88-201ENST00000225696 MTCL1Q9Y4B5 1905 aaKnown RBP11.71□□□□□ -0.53
NUP88-201ENST00000225696 TCF20Q9UGU0 1960 aaKnown RBP11.71□□□□□ -0.54
NUP88-201ENST00000225696 A0A0G2JN53 185 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 C12orf71A8MTZ7 269 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.54
NUP88-201ENST00000225696 CASKO14936 926 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 LYRM1O43325 122 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 SOD2P04179 222 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 CYP2A6P11509 494 aaPredicted RBP11.71□□□□□ -0.54
NUP88-201ENST00000225696 ZNF30P17039 623 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 DDCP20711 480 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 SDHBP21912 280 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 ERP29P30040 261 aaKnown RBP11.71□□□□□ -0.54
NUP88-201ENST00000225696 DCDC1P59894 354 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 ABATP80404 500 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 CDK5Q00535 292 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 TPBGQ13641 420 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 IL18Q14116 193 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 CLEC12AQ5QGZ9 265 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 ADIPOR2Q86V24 386 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 NR2C2APQ86WQ0 139 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 ANKRD53Q8N9V6 530 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 VN1R2Q8NFZ6 395 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 OR4F15Q8NGB8 312 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 XAGE5Q8WWM1 108 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 RASSF5Q8WWW0 418 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 AP2M1Q96CW1 435 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 GON7Q9BXV9 100 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 OR2AG1Q9H205 316 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 TBC1D17Q9HA65 648 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 CREBZFQ9NS37 354 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 TEX10Q9NXF1 929 aaPredicted RBP11.71□□□□□ -0.54
NUP88-201ENST00000225696 SLC23A1Q9UHI7 598 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 SLC25A13Q9UJS0 675 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 HSPB11Q9Y547 144 aa11.71□□□□□ -0.54
NUP88-201ENST00000225696 A0A1B0GVC2 190 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 FEZF1A0PJY2 475 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 A6NIN4 97 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 STK25O00506 426 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 FRS3O43559 492 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 LANCL1O43813 399 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 LILRB5O75023 590 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 PRKRAO75569 313 aaKnown RBP11.7□□□□□ -0.54
NUP88-201ENST00000225696 CRYZL1O95825 349 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 CH25HO95992 272 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 SOD1P00441 154 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 HLA-DQB1P01920 261 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 MYL12AP19105 171 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 IL12RB1P42701 662 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 OR3A3P47888 321 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 TNK1Q13470 666 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 WSCD2Q2TBF2 565 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 ZNF284Q2VY69 593 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 TRIQKQ629K1 86 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 LIX1LQ8IVB5 337 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 TBC1D19Q8N5T2 526 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 IL17RCQ8NAC3 791 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 C19orf18Q8NEA5 215 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 OR9A1PQ8NGU1 263 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 MRPS31Q92665 395 aaKnown RBP11.7□□□□□ -0.54
NUP88-201ENST00000225696 MTERF3Q96E29 417 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 QRFPRQ96P65 431 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 WACQ9BTA9 647 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 MED18Q9BUE0 208 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 LHX9Q9NQ69 397 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 KLHL21Q9UJP4 597 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 VCANP13611 3396 aa11.7□□□□□ -0.54
NUP88-201ENST00000225696 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 A0A1W2PRQ8 180 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ISM1B1AKI9 464 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 SLC30A4O14863 429 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 GRM6O15303 877 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 HRO43593 1189 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 C1QBP02746 253 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TFPIP10646 304 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ALPPL2P10696 532 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 POU3F3P20264 500 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 PTNP21246 168 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 RPL3P39023 403 aaKnown RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 EVX1P49640 407 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 MAPK12P53778 367 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 UBE3AQ05086 875 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 RAB33AQ14088 237 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms