RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 ZSCAN4Q8NAM6 433 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 FRS2Q8WU20 508 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 AKAP1Q92667 903 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX17-201ENST00000216019 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 FEVQ99581 238 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 IL20RAQ9UHF4 553 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 CLEC4EQ9ULY5 219 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 SLC1A7O00341 560 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 DENRO43583 198 aaKnown RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 SORT1Q99523 831 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 PELOQ9BRX2 385 aaKnown RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 ACTRT3Q9BYD9 372 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 TRBV2A0A0J9YWF9 115 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 HSPA12AO43301 675 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 LCN1P31025 176 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 RORAP35398 523 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 DEFB103AP81534 67 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 GALNT1Q10472 559 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 TMEM69Q5SWH9 247 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 ARHGAP11AQ6P4F7 1023 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 LEG1Q6P5S2 330 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 UBQLNLQ8IYU4 475 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 ELP5Q8TE02 316 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 BRF2Q9HAW0 419 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 FANCFQ9NPI8 374 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 NUAK1O60285 661 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 APBB3O95704 486 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 AK1P00568 194 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 PYCR1P32322 319 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 ZNF140P52738 457 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 CHRFAM7AQ494W8 412 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 DUS1LQ6P1R4 473 aaKnown RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 SLC5A8Q8N695 610 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 OR9A2Q8NGT5 310 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 RPLP0P6Q8NHW5 317 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 THRSPQ92748 146 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 SYT11Q9BT88 431 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 ZNF696Q9H7X3 374 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 ZNF701Q9NV72 531 aaPredicted RBP12.29□□□□□ -0.44
DDX17-201ENST00000216019 EPHA6Q9UF33 1036 aa12.29□□□□□ -0.44
DDX17-201ENST00000216019 TEX13CA0A0J9YWL9 993 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 SH3PXD2BA1X283 911 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ARHGEF15O94989 841 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
DDX17-201ENST00000216019 LHCGRP22888 699 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 TMPRSS12Q86WS5 348 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 NRMQ8IXM6 262 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 KDM1BQ8NB78 822 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 MGLLQ99685 303 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 WASF3Q9UPY6 502 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ISPDA4D126 451 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 NPC1O15118 1278 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 DPP6P42658 865 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 STT3AP46977 705 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 IST1P53990 364 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 RPA4Q13156 261 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 PLBD1Q6P4A8 553 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 DPPA4Q7L190 304 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 FAM3CQ92520 227 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 SERINC2Q96SA4 455 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 STARD5Q9NSY2 213 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 MAS1P04201 325 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 MAGEA12P43365 314 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 HTRA3P83110 453 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 GRK1Q15835 563 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ZNF181Q2M3W8 571 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 PYHIN1Q6K0P9 492 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 BEND4Q6ZU67 534 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ARHGAP12Q8IWW6 846 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 OR4K13Q8NH42 304 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 SLC22A8Q8TCC7 542 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 BORCS8Q96FH0 119 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 DMRT3Q9NQL9 472 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 MYF6P23409 242 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 IL4RP24394 825 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 HLCSP50747 726 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ACTA2P62736 377 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ACTG2P63267 376 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 GALK2Q01415 458 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ATXN7L3Q14CW9 347 aaPredicted RBP12.28□□□□□ -0.44
DDX17-201ENST00000216019 EMC10Q5UCC4 262 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 LRFN4Q6PJG9 635 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 ZNF700Q9H0M5 742 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 IL17CQ9P0M4 197 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 HCSTQ9UBK5 93 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 NUFIP1Q9UHK0 495 aaKnown RBP12.28□□□□□ -0.44
DDX17-201ENST00000216019 GMEB1Q9Y692 573 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 GXYLT2A0PJZ3 443 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 GPR37L1O60883 481 aa12.28□□□□□ -0.44
DDX17-201ENST00000216019 PRDX3P30048 256 aaKnown RBP12.28□□□□□ -0.44
DDX17-201ENST00000216019 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms