RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 IDO2Q6ZQW0 420 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 IQCF1Q8N6M8 205 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DCAF4L2Q8NA75 395 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF597Q96LX8 424 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 COG8Q96MW5 612 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NIPSNAP3BQ9BS92 247 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SUV39H2Q9H5I1 410 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 RYDENQ9NUL5 291 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DNAJC5BQ9UF47 199 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DKKL1Q9UK85 242 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PMF1-BGLAPU3KQ54 211 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 A0A087WUU8 490 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 UNGP13051 313 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 GABRR2P28476 465 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LCN8Q6JVE9 175 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SLC39A4Q6P5W5 647 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MAMDC2Q7Z304 686 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 C1orf52Q8N6N3 182 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PBX4Q9BYU1 374 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TM6SF2Q9BZW4 377 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ADAP2Q9NPF8 381 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 A0A1W2PS29 197 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SYPP08247 313 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ANXA7P20073 488 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MPSTP25325 297 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 AQP1P29972 269 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ARL2P36404 184 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 IDH3GP51553 393 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ELOCQ15369 112 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LYRM7Q5U5X0 104 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TMED4Q7Z7H5 227 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 C2CD4AQ8NCU7 369 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CHTF18Q8WVB6 975 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NMUR1Q9HB89 426 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SMPD4Q9NXE4 827 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SLC17A7Q9P2U7 560 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 A3GALT2U3KPV4 340 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ALS2Q96Q42 1657 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 GAPDHSO14556 408 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SEC14L5O43304 696 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LILRB5O75023 590 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MITFO75030 526 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PRKCGP05129 697 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CDK1P06493 297 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 FLYWCH1Q4VC44 716 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SCML4Q8N228 414 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PPP1R13LQ8WUF5 828 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 FOXJ1Q92949 421 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 HSH2DQ96JZ2 352 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF668Q96K58 619 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 RSPH9Q9H1X1 276 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NIPAL2Q9H841 368 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZFP37Q9Y6Q3 630 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF736B4DX44 427 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PPP3CBP16298 524 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 IL32P24001 234 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LEPRP48357 1165 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 RAB11AP62491 216 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NPRL3Q12980 569 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 QPCTQ16769 361 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DEFB115Q30KQ5 88 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SLC22A16Q86VW1 577 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PLXDC1Q8IUK5 500 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 M1APQ8TC57 530 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 IRF7Q92985 503 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TMBIM1Q969X1 311 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 POLLQ9UGP5 575 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 WIF1Q9Y5W5 379 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SEPT4O43236 478 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MFSD11O43934 449 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GPRIN2O60269 458 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ADRB3P13945 408 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ENGP17813 658 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PER3P56645 1201 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ACSBG2Q5FVE4 666 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RNASE10Q5GAN6 216 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 FAM117BQ6P1L5 589 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 INTS5Q6P9B9 1019 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TPRG1Q6ZUI0 275 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LANCL3Q6ZV70 420 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NLGN2Q8NFZ4 835 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SLC35B2Q8TB61 432 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LGALS12Q96DT0 336 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SUSD3Q96L08 255 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LYSMD1Q96S90 227 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TLE6Q9H808 572 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM248Q9NWD8 314 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 INSL6Q9Y581 213 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 C2orf78A6NCI8 922 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CPSF4LA6NMK7 179 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 E7EQ34 232 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RFPL3O75679 317 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MT-ND1P03886 318 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF133P52736 654 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MKRN4PQ13434 485 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 APOBEC3HQ6NTF7 200 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM173Q86WV6 379 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ADAMTS14Q8WXS8 1223 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 WACQ9BTA9 647 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PNPOQ9NVS9 261 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms