RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 KLHL1Q9NR64 748 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 PCDHGB6Q9Y5F9 930 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 WISP2O76076 250 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 PCSK2P16519 638 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 MRPS35P82673 323 aaKnown RBP24.7■■□□□ 1.54
VEGFA-231ENST00000640499 EXOSC7Q15024 291 aaKnown RBP24.7■■□□□ 1.54
VEGFA-231ENST00000640499 ZNF385BQ569K4 471 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 ZNF324BQ6AW86 544 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-231ENST00000640499 SLC25A25Q6KCM7 469 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 ANKRD26P1Q6NSI1 321 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 VWA5B2Q8N398 1253 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 OR9A2Q8NGT5 310 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 NUDT8Q8WV74 236 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 ADIPOR1Q96A54 375 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 PPP1R36Q96LQ0 422 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 BRINP2Q9C0B6 783 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 DTX4Q9Y2E6 619 aa24.7■■□□□ 1.54
VEGFA-231ENST00000640499 UBR5O95071 2799 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-231ENST00000640499 LRATO95237 230 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 PMP22Q01453 160 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 OCRLQ01968 901 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 TMEM156Q8N614 296 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 OR7G1Q8NGA0 311 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 C16orf52Q8NHV5 167 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 ZNF675Q8TD23 568 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 KAT2AQ92830 837 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 C1orf50Q9BV19 199 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 MANSC1Q9H8J5 431 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 THAP1Q9NVV9 213 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 MAP10Q9P2G4 905 aa24.69■■□□□ 1.54
VEGFA-231ENST00000640499 OR6C76A6NM76 312 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 TCP11X1B4DZS4 312 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 AKAP10O43572 662 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 SLC25A12O75746 678 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 WISP1O95388 367 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 PDE7AQ13946 482 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 ATP6AP1LQ52LC2 224 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 FHL5Q5TD97 284 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 IL20RBQ6UXL0 311 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 GALNTL5Q7Z4T8 443 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 RAB3IL1Q8TBN0 382 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 TUBGCP3Q96CW5 907 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 REEP4Q9H6H4 257 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 AKTIPQ9H8T0 292 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 MIEF1Q9NQG6 463 aa24.68■■□□□ 1.54
VEGFA-231ENST00000640499 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.68■■□□□ 1.542e-8■■□□□ 12.7
VEGFA-231ENST00000640499 NME2P1O60361 137 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 TBX19O60806 448 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 NME6O75414 186 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-231ENST00000640499 CD46P15529 392 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 NME2P22392 152 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 EMDP50402 254 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 ZNF791Q3KP31 576 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-231ENST00000640499 IL23RQ5VWK5 629 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 SLC29A4Q7RTT9 530 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 CYP4Z2PQ8N1L4 340 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 LIX1Q8N485 282 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 FAR1Q8WVX9 515 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 ASB15Q8WXK1 588 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 ZNF75CPQ92670 426 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-231ENST00000640499 ZNF764Q96H86 408 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-231ENST00000640499 GAL3ST4Q96RP7 486 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 NUF2Q9BZD4 464 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 GLIPR2Q9H4G4 154 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 PFDN4Q9NQP4 134 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 ENTPD4Q9Y227 616 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 EML6Q6ZMW3 1958 aa24.67■■□□□ 1.54
VEGFA-231ENST00000640499 C2orf92A0A1B0GVN3 265 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 HMGB1P1B2RPK0 211 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-231ENST00000640499 KLF11O14901 512 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 GPX3P22352 226 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 MST1P26927 711 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 UQCRFS1P47985 274 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 PTGR1Q14914 329 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 INAQ16352 499 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 SAMD14Q8IZD0 417 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-231ENST00000640499 HORMAD2Q8N7B1 307 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 OR7G2Q8NG99 324 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 OR52R1Q8NGF1 315 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 CIDECQ96AQ7 238 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-231ENST00000640499 C5orf34Q96MH7 638 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 AMDHD1Q96NU7 426 aa24.66■■□□□ 1.54
VEGFA-231ENST00000640499 ASPDHA6ND91 283 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 RASAL1O95294 804 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 CBX6O95503 412 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 EMX2Q04743 252 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 MAPKAPK3Q16644 382 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 TMEM64Q6YI46 380 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 GPALPP1Q8IXQ4 340 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 FNDC5Q8NAU1 212 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 GALNT11Q8NCW6 608 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 TP53INP1Q96A56 240 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 BBS4Q96RK4 519 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 MEAF6Q9HAF1 191 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 SH2D2AQ9NP31 389 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 DEPPQ9NTK1 212 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 GIMAP4Q9NUV9 329 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 BCAP29Q9UHQ4 241 aa24.65■■□□□ 1.54
VEGFA-231ENST00000640499 A8MVJ9 347 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 G6PDP11413 515 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms