RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RASGRP3Q8IV61 690 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 OR5P2Q8WZ92 322 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ARSGQ96EG1 525 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ZBED6CLQ96FA7 236 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 SLC35G5Q96KT7 338 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF354BQ96LW1 612 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 LRRC3BQ96PB8 259 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 FYTTD1Q96QD9 318 aaKnown RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 TMED9Q9BVK6 235 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 HDHD5Q9BXW7 423 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 PLA2G12AQ9BZM1 189 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 CMAHPQ9Y471 501 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 CAPN5O15484 640 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 LCMT2O60294 686 aaKnown RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 RPS25P62851 125 aaKnown RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 ILKQ13418 452 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 KIAA1161Q6NSJ0 714 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 NANOGNBQ7Z5D8 188 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 LAPTM4BQ86VI4 370 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 NEURL3Q96EH8 262 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 TEFMQ96QE5 360 aaKnown RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 SERHL2Q9H4I8 314 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 TXNL4BQ9NX01 149 aaKnown RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 SLC13A4Q9UKG4 626 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 PRAMEF27A3QJZ7 478 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 CASKO14936 926 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 TBX6O95947 436 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 CD79BP40259 229 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 PXNP49023 591 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 RAB8AP61006 207 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 NCF4Q15080 339 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 NDUFAF5Q5TEU4 345 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 SPRED2Q7Z698 418 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 NLGN4YQ8NFZ3 816 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 VWCEQ96DN2 955 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 C16orf58Q96GQ5 468 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 TAPBPLQ9BX59 468 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 IRAK3Q9Y616 596 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 CCDC182A6NF36 153 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 FAAHO00519 579 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 RB1P06400 928 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 ACP5P13686 325 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 EPCAMP16422 314 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 PTPN2P17706 415 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 PPM1AP35813 382 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 LARS2Q15031 903 aaKnown RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 SYT14P1Q58G82 188 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 LILRA6Q6PI73 481 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 FLCNQ8NFG4 579 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 OR8K5Q8NH50 307 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 EFHD2Q96C19 240 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 ZG16BQ96DA0 208 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 FERD3LQ96RJ6 166 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 DPH7Q9BTV6 452 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 RANGRFQ9HD47 186 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-221ENST00000640341 P2RX2Q9UBL9 471 aa13.8□□□□□ -0.2
SCARB2-221ENST00000640341 MEIOCA2RUB1 952 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 LILRB5O75023 590 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 NR2F6P10588 404 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 ADRB3P13945 408 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 KELP23276 732 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 SOX18P35713 384 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 RFX2P48378 723 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 KCNJ5P48544 419 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 GIPRP48546 466 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 TAS2R41P59536 307 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 SLX4IPQ5VYV7 408 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 SAXO2Q658L1 398 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 PAMR1Q6UXH9 720 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 UNC5DQ6UXZ4 953 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 ATP6V1C2Q8NEY4 427 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 OR52I1Q8NGK6 324 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 OR6F1Q8NGZ6 308 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 SLC25A19Q9HC21 320 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 SAGE1Q9NXZ1 904 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 HCN2Q9UL51 889 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 NTNG1Q9Y2I2 539 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 CLCA3PQ9Y6N3 262 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 V9GYH0 126 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 FAM47E-STBD1D6RA91 191 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 LILRB3O75022 631 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 MOSPD3O75425 235 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 PDE9AO76083 593 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 ADH5P11766 374 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 BSGP35613 385 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 RHAGQ02094 409 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 MFSD4BQ5TF39 518 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 TMEM107Q6UX40 140 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 NUDT13Q86X67 352 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 GALNT12Q8IXK2 581 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 NANOGP1Q8N7R0 232 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 C12orf76Q8N812 135 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-221ENST00000640341 GFM1Q96RP9 751 aaKnown RBP13.79□□□□□ -0.2
SCARB2-221ENST00000640341 TBX5Q99593 518 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 NEUROD4Q9HD90 331 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms