RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR10A5Q9H207 317 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 ANKRA2Q9H9E1 313 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 IL1RL2Q9HB29 575 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 MID1IP1Q9NPA3 183 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 MAT2BQ9NZL9 334 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 DCDC2Q9UHG0 476 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 CNOT11Q9UKZ1 510 aaKnown RBP16.32■□□□□ 0.2
PNKP-230ENST00000638016 ENTPD4Q9Y227 616 aa16.32■□□□□ 0.2
PNKP-230ENST00000638016 C1orf226A1L170 272 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 OR6C76A6NM76 312 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 PCDH7O60245 1069 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 PLIN3O60664 434 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 MYL2P10916 166 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 PORP16435 677 aaPredicted RBP16.31■□□□□ 0.2
PNKP-230ENST00000638016 KRT15P19012 456 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 SERPINB3P29508 390 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 MRPS35P82673 323 aaKnown RBP16.31■□□□□ 0.2
PNKP-230ENST00000638016 CSTF3Q12996 717 aaKnown RBP16.31■□□□□ 0.2
PNKP-230ENST00000638016 PRICKLE4Q2TBC4 344 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 SLC22A10Q63ZE4 541 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 MTFR2Q6P444 385 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 SLC22A16Q86VW1 577 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
PNKP-230ENST00000638016 C7orf57Q8NEG2 295 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 OR5M9Q8NGP3 310 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 ADIPOR1Q96A54 375 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 PNPLA3Q9NST1 481 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.31■□□□□ 0.2
PNKP-230ENST00000638016 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.31■□□□□ 0.2
PNKP-230ENST00000638016 MED12Q93074 2177 aa16.31■□□□□ 0.2
PNKP-230ENST00000638016 E9PLN8 166 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 ULK1O75385 1050 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 ESRRBO95718 433 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 ENDOUP21128 410 aaKnown RBP16.3■□□□□ 0.2
PNKP-230ENST00000638016 GPX3P22352 226 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 DEKP35659 375 aaKnown RBP16.3■□□□□ 0.2
PNKP-230ENST00000638016 VSNL1P62760 191 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 KCNJ2P63252 427 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 NTRK2Q16620 822 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 PRSS53Q2L4Q9 553 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 ARHGAP11AQ6P4F7 1023 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 VWA5B2Q8N398 1253 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 FBXW8Q8N3Y1 598 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 FAM109AQ8N4B1 249 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 JSRP1Q96MG2 331 aaPredicted RBP16.3■□□□□ 0.2
PNKP-230ENST00000638016 ZNF681Q96N22 645 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 VKORC1Q9BQB6 163 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 ITPAQ9BY32 194 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 NXF5Q9H1B4 397 aaKnown RBP16.3■□□□□ 0.2
PNKP-230ENST00000638016 ZNF703Q9H7S9 590 aaPredicted RBP16.3■□□□□ 0.2
PNKP-230ENST00000638016 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 DLGAP4Q9Y2H0 992 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 KLF2Q9Y5W3 355 aaPredicted RBP16.3■□□□□ 0.2
PNKP-230ENST00000638016 PTGDR2Q9Y5Y4 395 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 CSMD1Q96PZ7 3565 aa16.3■□□□□ 0.2
PNKP-230ENST00000638016 PHF3Q92576 2039 aaKnown RBP16.29■□□□□ 0.2
PNKP-230ENST00000638016 CBX7O95931 251 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 HSD3B1P14060 373 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 PCSK2P16519 638 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 HSD3B2P26439 372 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 SMSP52788 366 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 NAGLUP54802 743 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 PKNOX1P55347 436 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 ZNF630Q2M218 657 aaPredicted RBP16.29■□□□□ 0.2
PNKP-230ENST00000638016 TRMT12Q53H54 448 aaKnown RBP16.29■□□□□ 0.2
PNKP-230ENST00000638016 XKRXQ6PP77 449 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 TRILQ7L0X0 811 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 TDRPQ86YL5 185 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 SLC15A4Q8N697 577 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
PNKP-230ENST00000638016 SMC6Q96SB8 1091 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 SPRR3Q9UBC9 169 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 UTS2RQ9UKP6 389 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 PLLPQ9Y342 182 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 FBN2P35556 2912 aa16.29■□□□□ 0.2
PNKP-230ENST00000638016 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 GOLGA6L10A6NI86 522 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 HNRNPRO43390 633 aaKnown RBP16.28■□□□□ 0.2
PNKP-230ENST00000638016 GUCY1B2O75343 617 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 IGHG3P01860 377 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 ATP1B1P05026 303 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 ENO1P06733 434 aaKnown RBP16.28■□□□□ 0.2
PNKP-230ENST00000638016 KRT4P19013 534 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 CSNK2A2P19784 350 aaPredicted RBP16.28■□□□□ 0.2
PNKP-230ENST00000638016 TIA1P31483 386 aaKnown RBP eCLIP16.28■□□□□ 0.2
PNKP-230ENST00000638016 CRHR1P34998 444 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 KIR3DL1P43629 444 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 ACSM2AQ08AH3 577 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 HYAL4Q2M3T9 481 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 C6orf163Q5TEZ5 329 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 HLA-DQA1Q5Y7H0 255 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 ACSM2BQ68CK6 577 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 FRMD7Q6ZUT3 714 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 TAGAPQ8N103 731 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 CCDC63Q8NA47 563 aa16.28■□□□□ 0.2
PNKP-230ENST00000638016 OR52R1Q8NGF1 315 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms