RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HSPB3Q12988 150 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 AGKQ53H12 422 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 ANXA8L1Q5VT79 327 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 JMJD6Q6NYC1 403 aaPredicted RBP14.89□□□□□ -0.03
CLN6-216ENST00000636876 PIGWQ7Z7B1 504 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 GALNT16Q8N428 558 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 KIF2BQ8N4N8 673 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 CPSF7Q8N684 471 aaKnown RBP14.89□□□□□ -0.03
CLN6-216ENST00000636876 OR5P2Q8WZ92 322 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 ERP27Q96DN0 273 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 THOC3Q96J01 351 aaKnown RBP14.89□□□□□ -0.03
CLN6-216ENST00000636876 LHPPQ9H008 270 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 SAR1AQ9NR31 198 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 MRGBPQ9NV56 204 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 FAM120CQ9NX05 1096 aaKnown RBP14.89□□□□□ -0.03
CLN6-216ENST00000636876 COPS7AQ9UBW8 275 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 ZNF223Q9UK11 482 aaPredicted RBP14.89□□□□□ -0.03
CLN6-216ENST00000636876 GCN1Q92616 2671 aaKnown RBP14.89□□□□□ -0.03
CLN6-216ENST00000636876 NUP214P35658 2090 aaPredicted RBP14.88□□□□□ -0.03
CLN6-216ENST00000636876 PIEZO2Q9H5I5 2752 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 TRBV11-1A0A0K0K1C0 115 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 PLOD2O00469 737 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 RNASET2O00584 256 aaKnown RBP14.88□□□□□ -0.03
CLN6-216ENST00000636876 PLOD3O60568 738 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 SCN2BO60939 215 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 DNAJB5O75953 348 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 C6orf47O95873 294 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 CBX7O95931 251 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 FAM107AO95990 144 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 CLPSP04118 112 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 IL6P05231 212 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 PGRP06401 933 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 IFI6P09912 130 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 SSTR4P31391 388 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 CDK9P50750 372 aaKnown RBP14.88□□□□□ -0.03
CLN6-216ENST00000636876 CLCN2P51788 898 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 SLC37A1P57057 533 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 MRPS35P82673 323 aaKnown RBP14.88□□□□□ -0.03
CLN6-216ENST00000636876 TRMT12Q53H54 448 aaKnown RBP14.88□□□□□ -0.03
CLN6-216ENST00000636876 FHL5Q5TD97 284 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 TMEM107Q6UX40 140 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 RNF111Q6ZNA4 994 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 FUNDC1Q8IVP5 155 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 VPS37AQ8NEZ2 397 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 OR7G2Q8NG99 324 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 OR7G1Q8NGA0 311 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 EXTL1Q92935 676 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 ELP4Q96EB1 424 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLN6-216ENST00000636876 CCDC167Q9P0B6 97 aa14.88□□□□□ -0.03
CLN6-216ENST00000636876 A0A087WV62 115 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 PRSS51A0A1B0GVH4 220 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 A6NL46 340 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 CEACAM4O75871 244 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 GPC1P35052 558 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 MC3RP41968 323 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 RCAN2Q14206 197 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 MYBPC3Q14896 1274 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 EXOSC7Q15024 291 aaKnown RBP14.87□□□□□ -0.03
CLN6-216ENST00000636876 TIGD2Q4W5G0 525 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 SOWAHCQ53LP3 525 aaPredicted RBP14.87□□□□□ -0.03
CLN6-216ENST00000636876 IRAK1BP1Q5VVH5 260 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 H3F3CQ6NXT2 135 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 BLOC1S3Q6QNY0 202 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 HSDL2Q6YN16 418 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 MSANTD1Q6ZTZ1 278 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
CLN6-216ENST00000636876 CLECL1Q8IZS7 167 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 ZNF615Q8N8J6 731 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 PSMA8Q8TAA3 256 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 BRIX1Q8TDN6 353 aaKnown RBP14.87□□□□□ -0.03
CLN6-216ENST00000636876 PSMF1Q92530 271 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 OR52E6Q96RD3 313 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 DEFB126Q9BYW3 111 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 NMUR2Q9GZQ4 415 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 OR10A5Q9H207 317 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 SIRT3Q9NTG7 399 aaPredicted RBP14.87□□□□□ -0.03
CLN6-216ENST00000636876 PTGFRNQ9P2B2 879 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 BCAP29Q9UHQ4 241 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 BTNL2Q9UIR0 455 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 ARL2BPQ9Y2Y0 163 aa14.87□□□□□ -0.03
CLN6-216ENST00000636876 OR6C76A6NM76 312 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 NR5A2O00482 541 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 FCHO1O14526 889 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 CFLARO15519 480 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 PRKNO60260 465 aaPredicted RBP14.86□□□□□ -0.03
CLN6-216ENST00000636876 CCDC22O60826 627 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 BCAS2O75934 225 aaPredicted RBP14.86□□□□□ -0.03
CLN6-216ENST00000636876 ZFAND5O76080 213 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 KCNK10P57789 538 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 DUSP8Q13202 625 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 UBAP2LQ14157 1087 aaKnown RBP14.86□□□□□ -0.03
CLN6-216ENST00000636876 ANKRD46Q86W74 232 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 C9orf40Q8IXQ3 194 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 OR2L13Q8N349 312 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 SIRT6Q8N6T7 355 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 SIMC1Q8NDZ2 872 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 OR52R1Q8NGF1 315 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 OR8K3Q8NH51 312 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 VPS33AQ96AX1 596 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms