RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 H3BMM5 538 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 M0R3H8 397 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KPNA5O15131 536 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CD3EAPO15446 510 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 HNRNPRO43390 633 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KLF7O75840 302 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CAPN1P07384 714 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MAGP20916 626 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 GPX3P22352 226 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ELAVL4P26378 380 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 NDUFS1P28331 727 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RORAP35398 523 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CHN2P52757 468 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FOLH1Q04609 750 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 TRAP1Q12931 704 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 STX5Q13190 355 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 LIN52Q52LA3 116 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CLEC6AQ6EIG7 209 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MRNIPQ6NTE8 343 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PAOXQ6QHF9 649 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ARPINQ7Z6K5 226 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FUNDC1Q8IVP5 155 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ICA1LQ8NDH6 482 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 OR1N1Q8NGS0 311 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 HM13Q8TCT9 377 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF483Q8TF39 744 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ELMO1Q92556 727 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 LPGAT1Q92604 370 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 C8orf44Q96CB5 159 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PHF21BQ96EK2 531 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RAX2Q96IS3 184 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 C3orf30Q96M34 536 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 GPATCH1Q9BRR8 931 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MRPL1Q9BYD6 325 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PITHD1Q9GZP4 211 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 TFB2MQ9H5Q4 396 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 INTS10Q9NVR2 710 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 NLE1Q9NVX2 485 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 HEBP2Q9Y5Z4 205 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PRORSD1PA6NEY8 169 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 BBIP1A8MTZ0 92 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 H0YJX3 145 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 GAPDHSO14556 408 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KLK8O60259 260 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KCNJ13O60928 360 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KERAO60938 352 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SMIM24O75264 130 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RPS17P08708 135 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RAB40ALP0C0E4 278 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PABPC4LP0CB38 370 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PRR35P0CG20 571 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ATP1B2P14415 290 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MC4RP32245 332 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 OR1D4P47884 311 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PER3P56645 1201 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MVKQ03426 396 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SSPNQ14714 243 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZIC1Q15915 447 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RBBP7Q16576 425 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MMEL1Q495T6 779 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 AGKQ53H12 422 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZDHHC20Q5W0Z9 365 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SPESP1Q6UW49 350 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FAM180AQ6UWF9 173 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SERPINA9Q86WD7 417 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ST13P4Q8IZP2 240 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RNF148Q8N7C7 305 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SLCO4A1Q96BD0 722 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 IL17FQ96PD4 163 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 TSC22D3Q99576 134 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 C1QTNF3Q9BXJ4 246 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 DERL2Q9GZP9 239 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 EPS8L2Q9H6S3 715 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SPAG4Q9NPE6 437 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SLC52A3Q9NQ40 469 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PLA2G3Q9NZ20 509 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 NFKBIL1Q9UBC1 381 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ABCD2Q9UBJ2 740 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 IKZF3Q9UKT9 509 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 DNAJC15Q9Y5T4 150 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FLNAP21333 2647 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 STAB1Q9NY15 2570 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 WIPF3A6NGB9 483 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 UBXN8O00124 270 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MRASO14807 208 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CFLARO15519 480 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 NRP2O60462 931 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 JRKO75564 520 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CEACAM4O75871 244 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MATN4O95460 622 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 UGT2B7P16662 529 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF26P17031 533 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CD9P21926 228 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AOAHP28039 575 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MSX2P35548 267 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 HSPA13P48723 471 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ARG2P78540 354 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 DMPKQ09013 629 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms