RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 TMEM178AQ8NBL3 297 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 ADCY4Q8NFM4 1077 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 TMEM125Q96AQ2 219 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 CTHRC1Q96CG8 243 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 BBS4Q96RK4 519 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 GAL3ST4Q96RP7 486 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 BARD1Q99728 777 aaKnown RBP12.66□□□□□ -0.38
PFDN5-220ENST00000628881 HES7Q9BYE0 225 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 REEP4Q9H6H4 257 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 MANSC1Q9H8J5 431 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
PFDN5-220ENST00000628881 ASF1BQ9NVP2 202 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 PNPOQ9NVS9 261 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 HPF1Q9NWY4 346 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF639Q9UID6 485 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 CFL2Q9Y281 166 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 NTNG1Q9Y2I2 539 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 CROCCQ5TZA2 2017 aa12.66□□□□□ -0.38
PFDN5-220ENST00000628881 C2orf92A0A1B0GVN3 265 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 PYCARD-AS1I3L0S3 204 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 KLF11O14901 512 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 TBX19O60806 448 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 RASAL1O95294 804 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 CBX7O95931 251 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 NTSP30990 170 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 SOX18P35713 384 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 SOX3P41225 446 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 MAD2L1Q13257 205 aaPredicted RBP12.65□□□□□ -0.38
PFDN5-220ENST00000628881 PRSS53Q2L4Q9 553 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 SMU1Q2TAY7 513 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 SLC25A25Q6KCM7 469 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 OPN5Q6U736 354 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 FAM180AQ6UWF9 173 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 FAM9CQ8IZT9 166 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 LIX1Q8N485 282 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF441Q8N8Z8 693 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 OR9A2Q8NGT5 310 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 CLHC1Q8NHS4 586 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 GFM2Q969S9 779 aaKnown RBP12.65□□□□□ -0.38
PFDN5-220ENST00000628881 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 ACBD3Q9H3P7 528 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 KLHL1Q9NR64 748 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 AGPAT4Q9NRZ5 378 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 BCAP29Q9UHQ4 241 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 ERVK-11Q9UQG0 969 aa12.65□□□□□ -0.38
PFDN5-220ENST00000628881 AKAP10O43572 662 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 NME2P1O60361 137 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 ZNF354AO60765 605 aaPredicted RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 SLITRK5O94991 958 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 OR6B1O95007 311 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 LRATO95237 230 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 WISP1O95388 367 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 NADKO95544 446 aaPredicted RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PRPS2P11908 318 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PCSK2P16519 638 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 DDX5P17844 614 aaKnown RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 NME2P22392 152 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 NCBP2P52298 156 aaKnown RBP eCLIP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PPP2R2AP63151 447 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 OCRLQ01968 901 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 EMX2Q04743 252 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PDE7AQ13946 482 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 EXOSC7Q15024 291 aaKnown RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 TRMT12Q53H54 448 aaKnown RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 IL23RQ5VWK5 629 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 HLA-DQA1Q5Y7H0 255 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 IL20RBQ6UXL0 311 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 GALNTL5Q7Z4T8 443 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 BCORP1Q8N888 145 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 FAM98AQ8NCA5 519 aaKnown RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 GALNT11Q8NCW6 608 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 OR52R1Q8NGF1 315 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 ZNF75CPQ92670 426 aaPredicted RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 TP53INP1Q96A56 240 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PPCDCQ96CD2 204 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 MTERF3Q96E29 417 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PPP1R36Q96LQ0 422 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 TAAR6Q96RI8 345 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 C1orf50Q9BV19 199 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 GLIPR2Q9H4G4 154 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 AKTIPQ9H8T0 292 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 MEAF6Q9HAF1 191 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 TIMMDC1Q9NPL8 285 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 ASIC5Q9NY37 505 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 EIF3LQ9Y262 564 aaKnown RBP12.64□□□□□ -0.39
PFDN5-220ENST00000628881 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
PFDN5-220ENST00000628881 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
PFDN5-220ENST00000628881 SCAMP2O15127 329 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms