RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 GABARAPL1Q9H0R8 117 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ZFP64Q9NPA5 681 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 NDRG3Q9UGV2 375 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ABT1Q9ULW3 272 aaKnown RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 TPRKBQ9Y3C4 175 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SAMHD1Q9Y3Z3 626 aaKnown RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 GPR37O15354 613 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 YY2O15391 372 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CCNB2O95067 398 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CXCL14O95715 111 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 DHFRP00374 187 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 FABP3P05413 133 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 OR56A5P0C7T3 313 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ZNF806P0C7X5 589 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CKMT1AP12532 417 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 DNAJA1P31689 397 aaKnown RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 WNT3P56703 355 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ABATP80404 500 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SP3Q02447 781 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CHIT1Q13231 466 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ALKBH1Q13686 389 aaKnown RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 UGT8Q16880 541 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 FAM76BQ5HYJ3 339 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 PDZK1Q5T2W1 519 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CAPN13Q6MZZ7 669 aaPredicted RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
LITAF-221ENST00000622633 GLCCI1Q86VQ1 547 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 MS4A15Q8N5U1 240 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 IL17RCQ8NAC3 791 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 OR11H4Q8NGC9 324 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 OR8D4Q8NGM9 314 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 C10orf90Q96M02 699 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 HHIPQ96QV1 700 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 RASSF1Q9NS23 344 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SCN3BQ9NY72 215 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ADAM30Q9UKF2 790 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 SESN1Q9Y6P5 492 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 A0A1W2PRQ8 180 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 MPTX1A8MV57 137 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PLA2G10O15496 165 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 SH3BGRLO75368 114 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PDE9AO76083 593 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 C8GP07360 202 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 COX7A2P14406 83 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PRPS1L1P21108 318 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PRPH2P23942 346 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 HOXA9P31269 272 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PPP3CCP48454 512 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 ALDH9A1P49189 494 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 CCL23P55773 120 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 C21orf58P58505 322 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 FGL1Q08830 312 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 DDX39BQ13838 428 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 TPGS2Q68CL5 300 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 IKBIPQ70UQ0 350 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PAQR7Q86WK9 346 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 PTOV1Q86YD1 416 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 ZNF540Q8NDQ6 660 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 EXOSC8Q96B26 276 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 HSH2DQ96JZ2 352 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 QRFPRQ96P65 431 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 SLC22A11Q9NSA0 550 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 ABCB8Q9NUT2 735 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 CFAP97Q9P2B7 532 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 LOC100506127A0A0U1RQW1 187 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 MAGEB17A8MXT2 336 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 TERTO14746 1132 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 RGS10O43665 173 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 SCN2BO60939 215 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 FAM20BO75063 409 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 APBB3O95704 486 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 NUDT7P0C024 238 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 COX5BP10606 129 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 HOXB6P17509 224 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 FPR1P21462 350 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 EPHB3P54753 998 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 CASP6P55212 293 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 MTAPQ13126 283 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 KEAP1Q14145 624 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 SAXO2Q658L1 398 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 SLC25A25Q6KCM7 469 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 RASSF6Q6ZTQ3 369 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 FAM92BQ6ZTR7 304 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 POP5Q969H6 163 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 TPD52L3Q96J77 140 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 LYSMD1Q96S90 227 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 MND1Q9BWT6 205 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 ZCCHC2Q9C0B9 1178 aaKnown RBP11.82□□□□□ -0.52
LITAF-221ENST00000622633 BTBD1Q9H0C5 482 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 SUV39H2Q9H5I1 410 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 IL21Q9HBE4 155 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 GALNT9Q9HCQ5 603 aa11.82□□□□□ -0.52
LITAF-221ENST00000622633 THUMPD1Q9NXG2 353 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms