RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ARHGAP24Q8N264 748 aa15.02■□□□□ -0
CD40-207ENST00000620709 RNF175Q8N4F7 328 aa15.02■□□□□ -0
CD40-207ENST00000620709 TSPEARQ8WU66 669 aa15.02■□□□□ -0
CD40-207ENST00000620709 MCUR1Q96AQ8 359 aa15.02■□□□□ -0
CD40-207ENST00000620709 RCN3Q96D15 328 aa15.02■□□□□ -0
CD40-207ENST00000620709 APIPQ96GX9 242 aa15.02■□□□□ -0
CD40-207ENST00000620709 NDE1Q9NXR1 346 aa15.02■□□□□ -0
CD40-207ENST00000620709 PRPS2P11908 318 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 RNH1P13489 461 aaKnown RBP15.02□□□□□ -0.01
CD40-207ENST00000620709 CD1EP15812 388 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 NUDT2P50583 147 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 RPS13P62277 151 aaKnown RBP15.02□□□□□ -0.01
CD40-207ENST00000620709 ACSM2AQ08AH3 577 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 HYAL2Q12891 473 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 MMEL1Q495T6 779 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 SPIN4Q56A73 249 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 ACSM2BQ68CK6 577 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 ADNP2Q6IQ32 1131 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.02□□□□□ -0.01
CD40-207ENST00000620709 LIX1Q8N485 282 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 FBXO27Q8NI29 283 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 FCRL1Q96LA6 429 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 SERPINI1Q99574 410 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 SLC6A16Q9GZN6 736 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 EFCAB1Q9HAE3 211 aa15.02□□□□□ -0.01
CD40-207ENST00000620709 FAM234BA2RU67 622 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 ANKDD1BA6NHY2 528 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 AIM2O14862 343 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 WISP2O76076 250 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 MYO1DO94832 1006 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 KRT16P08779 473 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 CPOXP36551 454 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 CASP6P55212 293 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 UFM1P61960 85 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 ALDH6A1Q02252 535 aaKnown RBP15.01□□□□□ -0.01
CD40-207ENST00000620709 ART3Q13508 389 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 RCAN2Q14206 197 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 MAPKAPK3Q16644 382 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 REP15Q6BDI9 236 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 C16orf89Q6UX73 402 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 GALNTL5Q7Z4T8 443 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 RPS19BP1Q86WX3 136 aaKnown RBP15.01□□□□□ -0.01
CD40-207ENST00000620709 CA13Q8N1Q1 262 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 HORMAD2Q8N7B1 307 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 TMEM178AQ8NBL3 297 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 MDS2Q8NDY4 140 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 TTLQ8NG68 377 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 RELTQ969Z4 430 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 ZBTB18Q99592 522 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 CADM1Q9BY67 442 aaKnown RBP15.01□□□□□ -0.01
CD40-207ENST00000620709 MRPL1Q9BYD6 325 aaKnown RBP15.01□□□□□ -0.01
CD40-207ENST00000620709 NECTIN3Q9NQS3 549 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 LRFN1Q9P244 771 aa15.01□□□□□ -0.01
CD40-207ENST00000620709 C4orf51C9J302 202 aa15□□□□□ -0.01
CD40-207ENST00000620709 NPIPA5E9PKD4 350 aa15□□□□□ -0.01
CD40-207ENST00000620709 ANKRD28O15084 1053 aa15□□□□□ -0.01
CD40-207ENST00000620709 GSC2O15499 205 aa15□□□□□ -0.01
CD40-207ENST00000620709 ETHE1O95571 254 aa15□□□□□ -0.01
CD40-207ENST00000620709 BCKDHAP12694 445 aa15□□□□□ -0.01
CD40-207ENST00000620709 GSTM2P28161 218 aa15□□□□□ -0.01
CD40-207ENST00000620709 TPP2P29144 1249 aaPredicted RBP15□□□□□ -0.01
CD40-207ENST00000620709 POLR2JP52435 117 aaKnown RBP15□□□□□ -0.01
CD40-207ENST00000620709 STXBP1P61764 594 aaKnown RBP15□□□□□ -0.01
CD40-207ENST00000620709 SLC25A3Q00325 362 aa15□□□□□ -0.01
CD40-207ENST00000620709 COQ5Q5HYK3 327 aa15□□□□□ -0.01
CD40-207ENST00000620709 SP5Q6BEB4 398 aaPredicted RBP15□□□□□ -0.01
CD40-207ENST00000620709 BLOC1S3Q6QNY0 202 aa15□□□□□ -0.01
CD40-207ENST00000620709 QSOX2Q6ZRP7 698 aa15□□□□□ -0.01
CD40-207ENST00000620709 PNPLA5Q7Z6Z6 429 aaPredicted RBP15□□□□□ -0.01
CD40-207ENST00000620709 FAM98AQ8NCA5 519 aaKnown RBP15□□□□□ -0.01
CD40-207ENST00000620709 ELP5Q8TE02 316 aa15□□□□□ -0.01
CD40-207ENST00000620709 CREB3L4Q8TEY5 395 aa15□□□□□ -0.01
CD40-207ENST00000620709 THAP3Q8WTV1 239 aaPredicted RBP15□□□□□ -0.01
CD40-207ENST00000620709 SPDL1Q96EA4 605 aa15□□□□□ -0.01
CD40-207ENST00000620709 MAGED4Q96JG8 741 aa15□□□□□ -0.01
CD40-207ENST00000620709 TEX37Q96LM6 180 aa15□□□□□ -0.01
CD40-207ENST00000620709 DPY30Q9C005 99 aa15□□□□□ -0.01
CD40-207ENST00000620709 MMADHCQ9H3L0 296 aaPredicted RBP15□□□□□ -0.01
CD40-207ENST00000620709 PRDM9Q9NQV7 894 aa15□□□□□ -0.01
CD40-207ENST00000620709 PNO1Q9NRX1 252 aaKnown RBP15□□□□□ -0.01
CD40-207ENST00000620709 NPIPA1Q9UND3 350 aa15□□□□□ -0.01
CD40-207ENST00000620709 DLGAP4Q9Y2H0 992 aa15□□□□□ -0.01
CD40-207ENST00000620709 NDUFAF1Q9Y375 327 aa15□□□□□ -0.01
CD40-207ENST00000620709 SAGE2PA6NJ88 616 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 MRASO14807 208 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 ANGPT2O15123 496 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 ERI3O43414 337 aaKnown RBP14.99□□□□□ -0.01
CD40-207ENST00000620709 SP1P08047 785 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 CAPN3P20807 821 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 PTX3P26022 381 aaPredicted RBP14.99□□□□□ -0.01
CD40-207ENST00000620709 CLNS1AP54105 237 aaKnown RBP14.99□□□□□ -0.01
CD40-207ENST00000620709 TBL3Q12788 808 aaKnown RBP14.99□□□□□ -0.01
CD40-207ENST00000620709 PTGR1Q14914 329 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 ZNF468Q5VIY5 522 aaPredicted RBP14.99□□□□□ -0.01
CD40-207ENST00000620709 SLC25A25Q6KCM7 469 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 NOXRED1Q6NXP6 359 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 VN1R5Q7Z5H4 357 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 PCYOX1LQ8NBM8 494 aa14.99□□□□□ -0.01
CD40-207ENST00000620709 GLB1L3Q8NCI6 653 aaPredicted RBP14.99□□□□□ -0.01
CD40-207ENST00000620709 CHTF18Q8WVB6 975 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms