RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ZNF321PQ8N8H1 164 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 SLC2A12Q8TD20 617 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 UCN3Q969E3 161 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 RBM18Q96H35 190 aaKnown RBP17.77■□□□□ 0.44
SGMS1-208ENST00000608287 MID1IP1Q9NPA3 183 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 VPS29Q9UBQ0 182 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 LGALS13Q9UHV8 139 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 MID2Q9UJV3 735 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 TIMM22Q9Y584 194 aa17.77■□□□□ 0.44
SGMS1-208ENST00000608287 CCDC151A5D8V7 595 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 DYRK3O43781 588 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 PRKNO60260 465 aaPredicted RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 CDC40O60508 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 ITGA10O75578 1167 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 ESRRBO95718 433 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 GPR75O95800 540 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 INHBBP09529 407 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 HSD3B1P14060 373 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 ALOX15P16050 662 aaPredicted RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 HSD3B2P26439 372 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 MAPK12P53778 367 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 DNAJB13P59910 316 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 NAA20P61599 178 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 GALNT1Q10472 559 aaPredicted RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 TBL3Q12788 808 aaKnown RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 CSTF3Q12996 717 aaKnown RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 OR52E8Q6IFG1 317 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 CLEC9AQ6UXN8 241 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 HSDL2Q6YN16 418 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 TRABD2AQ86V40 505 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 ARMC10Q8N2F6 343 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 TMEM156Q8N614 296 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 C1orf52Q8N6N3 182 aaKnown RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 NUDT8Q8WV74 236 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 APOPT1Q96IL0 206 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 KCNA7Q96RP8 456 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 LIN28AQ9H9Z2 209 aaKnown RBP17.76■□□□□ 0.43
SGMS1-208ENST00000608287 RASSF1Q9NS23 344 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 OXSMQ9NWU1 459 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 COPS7AQ9UBW8 275 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 PLEKHA6Q9Y2H5 1048 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 L3MBTL1Q9Y468 752 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 CSPG4Q6UVK1 2322 aa17.76■□□□□ 0.43
SGMS1-208ENST00000608287 JMJD1CQ15652 2540 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 FAM47E-STBD1D6RA91 191 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 UBFD1O14562 309 aaKnown RBP17.75■□□□□ 0.43
SGMS1-208ENST00000608287 PGRMC2O15173 223 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 OR10H2O60403 315 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 HEXAP06865 529 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 TRHRP34981 398 aaPredicted RBP17.75■□□□□ 0.43
SGMS1-208ENST00000608287 HTR6P50406 440 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 HLCSP50747 726 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 PMPCAQ10713 525 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 NDUFAF5Q5TEU4 345 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 C16orf47Q6ZP98 133 aaPredicted RBP17.75■□□□□ 0.43
SGMS1-208ENST00000608287 DGAT2L6Q6ZPD8 337 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 FRMD7Q6ZUT3 714 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 ST13P4Q8IZP2 240 aaPredicted RBP17.75■□□□□ 0.43
SGMS1-208ENST00000608287 MREGQ8N565 214 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 BANPQ8N9N5 519 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 OR5M3Q8NGP4 307 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 LRRC46Q96FV0 321 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 PELOQ9BRX2 385 aaKnown RBP17.75■□□□□ 0.43
SGMS1-208ENST00000608287 TRIM45Q9H8W5 580 aaPredicted RBP17.75■□□□□ 0.43
SGMS1-208ENST00000608287 MKS1Q9NXB0 559 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 PLLPQ9Y342 182 aa17.75■□□□□ 0.43
SGMS1-208ENST00000608287 FIGNL2A6NMB9 653 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 ZNHIT1O43257 154 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 GUCY1B2O75343 617 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 CRCPO75575 148 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 CHN1P15882 459 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 PIK3R1P27986 724 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 SSR4P51571 173 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 RNFT1Q5M7Z0 435 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 LIPMQ5VYY2 423 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 SCIMPQ6UWF3 145 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 ARSKQ6UWY0 536 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 PAMR1Q6UXH9 720 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 CCDC71Q8IV32 467 aaPredicted RBP17.74■□□□□ 0.43
SGMS1-208ENST00000608287 C10orf107Q8IVU9 208 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 ZZZ3Q8IYH5 903 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 GBP7Q8N8V2 638 aaPredicted RBP17.74■□□□□ 0.43
SGMS1-208ENST00000608287 DOK4Q8TEW6 326 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 ZNF721Q8TF20 911 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 SENP5Q96HI0 755 aaPredicted RBP17.74■□□□□ 0.43
SGMS1-208ENST00000608287 ART5Q96L15 291 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 GPATCH1Q9BRR8 931 aaKnown RBP17.74■□□□□ 0.43
SGMS1-208ENST00000608287 ACPTQ9BZG2 426 aa17.74■□□□□ 0.43
SGMS1-208ENST00000608287 YARS2Q9Y2Z4 477 aaKnown RBP17.74■□□□□ 0.43
SGMS1-208ENST00000608287 WWP2O00308 870 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 SPAG7O75391 227 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 OR2J2O76002 312 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 RAF1P04049 648 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 KIR2DL3P43628 341 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 ZFP36L2P47974 494 aaKnown RBP17.73■□□□□ 0.43
SGMS1-208ENST00000608287 HK2P52789 917 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 FOXA1P55317 472 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 RNF4P78317 190 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 HMGCS1Q01581 520 aa17.73■□□□□ 0.43
SGMS1-208ENST00000608287 PCLAFQ15004 111 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms