RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CLDN16Q9Y5I7 305 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 B3GALT1Q9Y5Z6 326 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 OR2W5A6NFC9 320 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 UPK1AO00322 258 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 PLOD3O60568 738 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 ENTPD5O75356 428 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 ALBP02768 609 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 ZGLP1P0C6A0 271 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 GGT1P19440 569 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 GALNSP34059 522 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 PRIM2P49643 509 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 CASP9P55211 416 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 TXNL4AP83876 142 aaKnown RBP21.13■□□□□ 0.97
IRF3-228ENST00000601291 RHAGQ02094 409 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 VMACQ2NL98 169 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 TMEM164Q5U3C3 297 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 LCN8Q6JVE9 175 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 ZZZ3Q8IYH5 903 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 VWA5B2Q8N398 1253 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 RIT1Q92963 219 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 GPN3Q9UHW5 284 aaPredicted RBP21.13■□□□□ 0.97
IRF3-228ENST00000601291 MKL2Q9ULH7 1088 aa21.13■□□□□ 0.97
IRF3-228ENST00000601291 NUP210LQ5VU65 1888 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 IGKV3D-11A0A0A0MRZ8 115 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 TNFRSF21O75509 655 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 HMGN2P05204 90 aaKnown RBP21.12■□□□□ 0.97
IRF3-228ENST00000601291 KHKP50053 298 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 DSTNP60981 165 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 RBBP4Q09028 425 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 MAP4K2Q12851 820 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 CCNIQ14094 377 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 GLYATQ6IB77 296 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 FAM111BQ6SJ93 734 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 CYP2R1Q6VVX0 501 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 PRSS58Q8IYP2 241 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 CACTIN-AS1Q8N1I8 211 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 C11orf65Q8NCR3 313 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 NCLNQ969V3 563 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 VN1R1Q9GZP7 353 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 SLC26A1Q9H2B4 701 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 CXorf21Q9HAI6 301 aa21.12■□□□□ 0.97
IRF3-228ENST00000601291 C19orf53Q9UNZ5 99 aaPredicted RBP21.12■□□□□ 0.97
IRF3-228ENST00000601291 CXCR6O00574 342 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 DYRK3O43781 588 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 MGRN1O60291 552 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 BMP2P12643 396 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 NCK1P16333 377 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 MATN1P21941 496 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 NOVA1P51513 510 aaKnown RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 RPS26P62854 115 aaKnown RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 LASP1Q14847 261 aaKnown RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 TRMT12Q53H54 448 aaKnown RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 C3orf38Q5JPI3 329 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 TNFAIP8L2Q6P589 184 aaPredicted RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 SPATA24Q86W54 205 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 PTOV1Q86YD1 416 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 FIG4Q92562 907 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 MR1Q95460 341 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 CTHRC1Q96CG8 243 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 ZNF578Q96N58 590 aaPredicted RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 TMEM38AQ9H6F2 299 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 NXT1Q9UKK6 140 aaKnown RBP21.11■□□□□ 0.97
IRF3-228ENST00000601291 PCDHGA3Q9Y5H0 932 aa21.11■□□□□ 0.97
IRF3-228ENST00000601291 C9J4A7 227 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 TM4SF5O14894 197 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 COQ9O75208 318 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 STK17BO94768 372 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 NUDT7P0C024 238 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 TNNI3P19429 210 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 ATP6V1B2P21281 511 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 ERFP50548 548 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 POLE2P56282 527 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 MGAT2Q10469 447 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 RIPK1Q13546 671 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 VEZF1Q14119 521 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 NSDHLQ15738 373 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 ADRM1Q16186 407 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 NKG7Q16617 165 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 ZNF630Q2M218 657 aaPredicted RBP21.1■□□□□ 0.97
IRF3-228ENST00000601291 FHL5Q5TD97 284 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 MLIPQ5VWP3 458 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 TMPRSS12Q86WS5 348 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 HORMAD2Q8N7B1 307 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 PLPP5Q8NEB5 264 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 MIPOL1Q8TD10 442 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 SLC26A7Q8TE54 656 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 TSLPQ969D9 159 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 RSRC1Q96IZ7 334 aaKnown RBP21.1■□□□□ 0.97
IRF3-228ENST00000601291 NSMCE2Q96MF7 247 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 OR51I1Q9H343 314 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 ANKRA2Q9H9E1 313 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 EQTNQ9NQ60 294 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 TCRBV16S1A1N1A0A5B0 115 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 TMEM247A6NEH6 219 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 VSTM2BA6NLU5 285 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 AQP12BA6NM10 295 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 HEXBP07686 556 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 CT62P0C5K7 136 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 PCGF2P35227 344 aa21.1■□□□□ 0.97
IRF3-228ENST00000601291 MTX3Q5HYI7 312 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms