RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 VWA5B2Q8N398 1253 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 TMEM156Q8N614 296 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 CPSF7Q8N684 471 aaKnown RBP14.56□□□□□ -0.08
RPS28-203ENST00000600659 TMEM178AQ8NBL3 297 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 ADCY4Q8NFM4 1077 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 OR5L2Q8NGL0 311 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 ZNF675Q8TD23 568 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 C5orf34Q96MH7 638 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 SORT1Q99523 831 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 OR10A5Q9H207 317 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 LRTM1Q9HBL6 345 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 C1orf109Q9NX04 203 aa14.56□□□□□ -0.08
RPS28-203ENST00000600659 ASH1LQ9NR48 2969 aaKnown RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 ANKUB1A6NFN9 424 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 A8MVJ9 347 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 RGS14O43566 566 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 DYRK3O43781 588 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 BGNP21810 368 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 GPX3P22352 226 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 MRPS35P82673 323 aaKnown RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 HEPACAMQ14CZ8 416 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 MAPKAPK3Q16644 382 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 TRMT12Q53H54 448 aaKnown RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 IL20RBQ6UXL0 311 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 SULF2Q8IWU5 870 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 GPALPP1Q8IXQ4 340 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 CCDC116Q8IYX3 515 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 LRRC25Q8N386 305 aaPredicted RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 HORMAD2Q8N7B1 307 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 PSD4Q8NDX1 1056 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 DNAJB8Q8NHS0 232 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 C16orf52Q8NHV5 167 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 ASB15Q8WXK1 588 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 EXOSC8Q96B26 276 aaKnown RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 ANKRA2Q9H9E1 313 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 EML4Q9HC35 981 aaKnown RBP14.55□□□□□ -0.08
RPS28-203ENST00000600659 SLC35C2Q9NQQ7 365 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 HPF1Q9NWY4 346 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 TAS2R7Q9NYW3 318 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 HAO1Q9UJM8 370 aa14.55□□□□□ -0.08
RPS28-203ENST00000600659 TMEM120BA0PK00 339 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 MYO1GB0I1T2 1018 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 SEMA7AO75326 666 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 SEC22BO75396 215 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 MYZAPP0CAP1 466 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 H2AFXP16104 143 aaPredicted RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 PCSK2P16519 638 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 MEOX1P50221 254 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 RPL38P63173 70 aaKnown RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 C2orf80Q0P641 193 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 EXOSC7Q15024 291 aaKnown RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 ZNF385BQ569K4 471 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 FHL5Q5TD97 284 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 IKBIPQ70UQ0 350 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 TICAM1Q8IUC6 712 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 CHERPQ8IWX8 916 aaKnown RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 ZNF781Q8N8C0 355 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 OR7G1Q8NGA0 311 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 OR9A2Q8NGT5 310 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 GAL3ST4Q96RP7 486 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 CCT7Q99832 543 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 BRINP2Q9C0B6 783 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.54□□□□□ -0.08
RPS28-203ENST00000600659 PSME2Q9UL46 239 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 WBP11Q9Y2W2 641 aaKnown RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 KLF13Q9Y2Y9 288 aaPredicted RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 NUP214P35658 2090 aaPredicted RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 ICE1Q9Y2F5 2266 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 FREM3P0C091 2139 aa14.54□□□□□ -0.08
RPS28-203ENST00000600659 USP9YO00507 2555 aaPredicted RBP14.54□□□□□ -0.08
RPS28-203ENST00000600659 DOPEY1Q5JWR5 2465 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 NBPF19A0A087WUL8 3843 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 TMEM114B3SHH9 223 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 SKAP2O75563 359 aaPredicted RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 CHEK2O96017 543 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 CRYABP02511 175 aaKnown RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 FBXO45P0C2W1 286 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 CCL3P10147 92 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 EMDP50402 254 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 SLC18A1P54219 525 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 KCNK10P57789 538 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 GPR85P60893 370 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 ABCE1P61221 599 aaKnown RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 MAGOHP61326 146 aaKnown RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 OPN5Q6U736 354 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 SLC29A4Q7RTT9 530 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 DDIASQ8IXT1 998 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 ZFP62Q8NB50 900 aaPredicted RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 GOLM1Q8NBJ4 401 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 CDC26Q8NHZ8 85 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 TMEM125Q96AQ2 219 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 ARL8AQ96BM9 186 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 SPACA9Q96E40 222 aaPredicted RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 ZNF764Q96H86 408 aaPredicted RBP14.53□□□□□ -0.08
RPS28-203ENST00000600659 ITPAQ9BY32 194 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 PROK2Q9HC23 129 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 KCNK9Q9NPC2 374 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 ZNF780BQ9Y6R6 833 aa14.53□□□□□ -0.08
RPS28-203ENST00000600659 SPTBN1Q01082 2364 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms