RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 FRMD6Q96NE9 622 aa26.07■■□□□ 1.76
SSBP4-206ENST00000599699 BBS4Q96RK4 519 aa26.07■■□□□ 1.76
SSBP4-206ENST00000599699 MAT2BQ9NZL9 334 aa26.07■■□□□ 1.76
SSBP4-206ENST00000599699 WBP11Q9Y2W2 641 aaKnown RBP26.07■■□□□ 1.76
SSBP4-206ENST00000599699 LYPLA1O75608 230 aaPredicted RBP26.06■■□□□ 1.76
SSBP4-206ENST00000599699 TDGF1P3P51864 188 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 RPL38P63173 70 aaKnown RBP26.06■■□□□ 1.76
SSBP4-206ENST00000599699 UBAP2LQ14157 1087 aaKnown RBP26.06■■□□□ 1.76
SSBP4-206ENST00000599699 CASP8Q14790 479 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 KIAA0040Q15053 153 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 FAM71E1Q6IPT2 247 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 TICAM1Q8IUC6 712 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 TAGAPQ8N103 731 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 SLC15A4Q8N697 577 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 ZNF615Q8N8J6 731 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 TSPAN10Q9H1Z9 355 aaPredicted RBP26.06■■□□□ 1.76
SSBP4-206ENST00000599699 SEC14L3Q9UDX4 400 aa26.06■■□□□ 1.76
SSBP4-206ENST00000599699 TMEM114B3SHH9 223 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 NPIPB8E9PQR5 432 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 SKAP2O75563 359 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-206ENST00000599699 AGFG2O95081 481 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 DHRS4L1P0CG22 281 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 ZNF24P17028 368 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 NR0B1P51843 470 aaKnown RBP26.05■■□□□ 1.76
SSBP4-206ENST00000599699 MAGOHP61326 146 aaKnown RBP26.05■■□□□ 1.76
SSBP4-206ENST00000599699 MGAT2Q10469 447 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 EXOSC7Q15024 291 aaKnown RBP26.05■■□□□ 1.76
SSBP4-206ENST00000599699 IKBIPQ70UQ0 350 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 SGCZQ96LD1 299 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 TMBIM4Q9HC24 238 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 OSGIN2Q9Y236 505 aa26.05■■□□□ 1.76
SSBP4-206ENST00000599699 SVILO95425 2214 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 NPIPA5E9PKD4 350 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 LSM1O15116 133 aaKnown RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 ITM2AO43736 263 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 UNC5CO95185 931 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 NADKO95544 446 aaPredicted RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 PCSK2P16519 638 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 S1PR1P21453 382 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 TACR1P25103 407 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 MPIP34949 423 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 RFC3P40938 356 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 KCNK10P57789 538 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 ABCE1P61221 599 aaKnown RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 MRPS35P82673 323 aaKnown RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 RFTN2Q52LD8 501 aaPredicted RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 TRMT12Q53H54 448 aaKnown RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 CES4AQ5XG92 561 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 OR9A2Q8NGT5 310 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 C16orf52Q8NHV5 167 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 PUM2Q8TB72 1066 aaKnown RBP eCLIP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 GFM2Q969S9 779 aaKnown RBP26.04■■□□□ 1.76
SSBP4-206ENST00000599699 NPIPA1Q9UND3 350 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 CFL2Q9Y281 166 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 TMED5Q9Y3A6 229 aa26.04■■□□□ 1.76
SSBP4-206ENST00000599699 TMEM120BA0PK00 339 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 G3V3Y1 287 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 P04436 131 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 BGNP21810 368 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 GRK2P25098 689 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 FAM9CQ8IZT9 166 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 GOLM1Q8NBJ4 401 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 POGLUT1Q8NBL1 392 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 OR52R1Q8NGF1 315 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 MGARPQ8TDB4 240 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 KAT2AQ92830 837 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 TP53INP1Q96A56 240 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 SPACA9Q96E40 222 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-206ENST00000599699 EGLN2Q96KS0 407 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 PPP3R2Q96LZ3 170 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 CCT7Q99832 543 aa26.03■■□□□ 1.76
SSBP4-206ENST00000599699 ZNF395Q9H8N7 513 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-206ENST00000599699 PEX11AO75192 247 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 NTSP30990 170 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 NRG3P56975 720 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 SRSF1Q07955 248 aaKnown RBP eCLIP26.02■■□□□ 1.765e-7■□□□□ 10.3
SSBP4-206ENST00000599699 ZNF791Q3KP31 576 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-206ENST00000599699 ZNF441Q8N8Z8 693 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 FAM13CQ8NE31 585 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 ZNF675Q8TD23 568 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 CTHRC1Q96CG8 243 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 TSSK3Q96PN8 268 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 SACM1LQ9NTJ5 587 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 GIMAP2Q9UG22 337 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 ZNF639Q9UID6 485 aa26.02■■□□□ 1.76
SSBP4-206ENST00000599699 ATP6AP2A0A1C7CYW4 349 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 CLEC18AA5D8T8 446 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 TFECO14948 347 aaPredicted RBP26.01■■□□□ 1.75
SSBP4-206ENST00000599699 AKAP10O43572 662 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 SEMA7AO75326 666 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 ATP6AP2O75787 350 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 LRATO95237 230 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 CBX7O95931 251 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 FBXO45P0C2W1 286 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 SDC1P18827 310 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 GPX3P22352 226 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 SLC1A6P48664 564 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 NCBP2P52298 156 aaKnown RBP eCLIP26.01■■□□□ 1.75
SSBP4-206ENST00000599699 STX3Q13277 289 aa26.01■■□□□ 1.75
SSBP4-206ENST00000599699 ATP6AP1LQ52LC2 224 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms