RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RPRMLQ8N4K4 120 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 MARVELD2Q8N4S9 558 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 TMEM251Q8N6I4 163 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 FAM13CQ8NE31 585 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 FAM57AQ8TBR7 257 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 SLC22A8Q8TCC7 542 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 MTBPQ96DY7 904 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 ART5Q96L15 291 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 DMRTA2Q96SC8 542 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 CCT8L2Q96SF2 557 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 FAM173AQ9BQD7 235 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 C1QTNF3Q9BXJ4 246 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 CXorf21Q9HAI6 301 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 SACM1LQ9NTJ5 587 aa12.69□□□□□ -0.38
SCAF1-203ENST00000598359 CSMD2Q7Z408 3487 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 PDZD2O15018 2839 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 ATP6AP2A0A1C7CYW4 349 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 NPIPA2E9PIF3 369 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 NPIPA3F8WFD2 350 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 MANBAO00462 879 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 HNRNPRO43390 633 aaKnown RBP12.68□□□□□ -0.38
SCAF1-203ENST00000598359 ATP6AP2O75787 350 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 CREB1P16220 341 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 TAC1P20366 129 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 NT5EP21589 574 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 DRD4P21917 467 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 HTR6P50406 440 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 XKP51811 444 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SEC24CP53992 1094 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 DUSP2Q05923 314 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 FOXO1Q12778 655 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 BIKQ13323 160 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 ZNF630Q2M218 657 aaPredicted RBP12.68□□□□□ -0.38
SCAF1-203ENST00000598359 EMC4Q5J8M3 183 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 XKRXQ6PP77 449 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SCIMPQ6UWF3 145 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 GK5Q6ZS86 529 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 PAGE2Q7Z2X7 111 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SLC34A3Q8N130 599 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 C1orf52Q8N6N3 182 aaKnown RBP12.68□□□□□ -0.38
SCAF1-203ENST00000598359 GOLM1Q8NBJ4 401 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 OR10G3Q8NGC4 313 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 OR4K14Q8NGD5 310 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 OR5M9Q8NGP3 310 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SPACA9Q96E40 222 aaPredicted RBP12.68□□□□□ -0.38
SCAF1-203ENST00000598359 CHMP6Q96FZ7 201 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SGCZQ96LD1 299 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 PELOQ9BRX2 385 aaKnown RBP12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SH2D2AQ9NP31 389 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 AHSPQ9NZD4 102 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 TRPS1Q9UHF7 1281 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 EMCNQ9ULC0 261 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 SNX6Q9UNH7 406 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 KLF2Q9Y5W3 355 aaPredicted RBP12.68□□□□□ -0.38
SCAF1-203ENST00000598359 EML6Q6ZMW3 1958 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 PCNX1Q96RV3 2341 aa12.68□□□□□ -0.38
SCAF1-203ENST00000598359 NCOA6Q14686 2063 aaPredicted RBP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 E9PLN8 166 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 ACOT7O00154 380 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 TYROBPO43914 113 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 ERAL1O75616 437 aaKnown RBP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 CPMP14384 443 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 ATP5F1P24539 256 aaPredicted RBP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 MPP2Q14168 576 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 SLC22A10Q63ZE4 541 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 ARHGAP11AQ6P4F7 1023 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 FAM111BQ6SJ93 734 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 GPRIN3Q6ZVF9 776 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 SLC22A16Q86VW1 577 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 MCEMP1Q8IX19 187 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 GALNT12Q8IXK2 581 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 PRR22Q8IZ63 422 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 SIMC1Q8NDZ2 872 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 C7orf57Q8NEG2 295 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 CKAP2Q8WWK9 683 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 TM4SF18Q96CE8 201 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 KCNA7Q96RP8 456 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 ZNF382Q96SR6 550 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 VKORC1Q9BQB6 163 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 C12orf65Q9H3J6 166 aaKnown RBP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 ZDHHC11Q9H8X9 412 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 PROK2Q9HC23 129 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 PNPLA3Q9NST1 481 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 CES1P1Q9UKY3 287 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 DTX4Q9Y2E6 619 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 TIMM22Q9Y584 194 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 PCDHA9Q9Y5H5 950 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.67□□□□□ -0.38
SCAF1-203ENST00000598359 GTF3C1Q12789 2109 aa12.67□□□□□ -0.38
SCAF1-203ENST00000598359 C2orf92A0A1B0GVN3 265 aa12.66□□□□□ -0.38
SCAF1-203ENST00000598359 OR6C76A6NM76 312 aa12.66□□□□□ -0.38
SCAF1-203ENST00000598359 CLDN14O95500 239 aa12.66□□□□□ -0.38
SCAF1-203ENST00000598359 FBXO45P0C2W1 286 aa12.66□□□□□ -0.38
SCAF1-203ENST00000598359 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
SCAF1-203ENST00000598359 PORP16435 677 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms