RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZNF763Q0D2J5 394 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 MAP4K2Q12851 820 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 EXOSC7Q15024 291 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 CEBPEQ15744 281 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 ZNF791Q3KP31 576 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 FHL5Q5TD97 284 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 FAM71E1Q6IPT2 247 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 NOXRED1Q6NXP6 359 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 GPALPP1Q8IXQ4 340 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 LRRC25Q8N386 305 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 VWA5B2Q8N398 1253 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 ZFP62Q8NB50 900 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 FAM76AQ8TAV0 307 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 AGR3Q8TD06 166 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 ADIPOR1Q96A54 375 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 TMEM125Q96AQ2 219 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 EXOSC8Q96B26 276 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 EGLN2Q96KS0 407 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 FCRL1Q96LA6 429 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 GAL3ST4Q96RP7 486 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 OR10A5Q9H207 317 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 CENPHQ9H3R5 247 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 SH2D2AQ9NP31 389 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 MYNNQ9NPC7 610 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 HPF1Q9NWY4 346 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 ERVK-11Q9UQG0 969 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 KLF13Q9Y2Y9 288 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 TRAF6Q9Y4K3 522 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 PCNX3Q9H6A9 2034 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 PHF3Q92576 2039 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 C2orf92A0A1B0GVN3 265 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 G3V3Y1 287 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 PIP5K1BO14986 540 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 LSM1O15116 133 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ITM2AO43736 263 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 PEX1O43933 1283 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SEC22BO75396 215 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 LYPLA1O75608 230 aaPredicted RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 UNC5CO95185 931 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 CCL3P10147 92 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF24P17028 368 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 DDCP20711 480 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 GPX3P22352 226 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SERPINB5P36952 375 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 GSTM5P46439 218 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 NR0B1P51843 470 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 MRPS35P82673 323 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ALDH6A1Q02252 535 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ELOAQ14241 798 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 TRMT12Q53H54 448 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF628Q5EBL2 1059 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 XKR7Q5GH72 579 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SH2D4BQ5SQS7 431 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 OPN5Q6U736 354 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 TMEM64Q6YI46 380 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 RTL4Q6ZR62 310 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC29A4Q7RTT9 530 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 NUDCD3Q8IVD9 361 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 CHERPQ8IWX8 916 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 CCDC116Q8IYX3 515 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 CLYBLQ8N0X4 340 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 OR7G1Q8NGA0 311 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 C16orf52Q8NHV5 167 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF675Q8TD23 568 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 TWIST2Q8WVJ9 160 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SPACA9Q96E40 222 aaPredicted RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 GPR137Q96N19 417 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 BRINP2Q9C0B6 783 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF395Q9H8N7 513 aaPredicted RBP10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ANKRA2Q9H9E1 313 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 LRTM1Q9HBL6 345 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 TIMMDC1Q9NPL8 285 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC35C2Q9NQQ7 365 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 C1orf109Q9NX04 203 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 EHD3Q9NZN3 535 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 SEC14L3Q9UDX4 400 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 GIMAP2Q9UG22 337 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ZDHHC2Q9UIJ5 367 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 PSME2Q9UL46 239 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 OSGIN2Q9Y236 505 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ACTL7BQ9Y614 415 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 ARHGAP21Q5T5U3 1957 aa10.14□□□□□ -0.79
SHKBP1-206ENST00000595523 WDR91A4D1P6 747 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 WIPF3A6NGB9 483 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 KLRC4-KLRK1H3BQV0 150 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC28A1O00337 649 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 TM9SF1O15321 606 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNHIT1O43257 154 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 RGS14O43566 566 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 NME6O75414 186 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 AGFG2O95081 481 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 LDLRP01130 860 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 JUNP05412 331 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 STSP08842 583 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms