RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 HS6ST1O60243 411 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 ZG16O60844 167 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 CCL3P10147 92 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 CSNK2A2P19784 350 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 PTGER1P34995 402 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 FEN1P39748 380 aaKnown RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 HSF1Q00613 529 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 DUSP2Q05923 314 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF791Q3KP31 576 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 BNC2Q6ZN30 1099 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 Q6ZPB1 254 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 GK5Q6ZS86 529 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 CHERPQ8IWX8 916 aaKnown RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 DND1Q8IYX4 353 aaKnown RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 SLC34A3Q8N130 599 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 VWA5B2Q8N398 1253 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF615Q8N8J6 731 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 TRMOQ9BU70 441 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 TMEM109Q9BVC6 243 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 GATA5Q9BWX5 397 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 EBPLQ9BY08 206 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 SACM1LQ9NTJ5 587 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 MAT2BQ9NZL9 334 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 SH3BGRL2Q9UJC5 107 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 UTS2RQ9UKP6 389 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 PSME2Q9UL46 239 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 DLGAP4Q9Y2H0 992 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF835Q9Y2P0 537 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 C2orf92A0A1B0GVN3 265 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 ACOT7O00154 380 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 TRIM13O60858 407 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 RSL1D1O76021 490 aaKnown RBP13.93□□□□□ -0.18
TRIM28-205ENST00000595028 FBXO45P0C2W1 286 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 UROSP10746 265 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 DRD2P14416 443 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SERPINB3P29508 390 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 GSTM5P46439 218 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 CASP6P55212 293 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 MGAT2Q10469 447 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 C3AR1Q16581 482 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 IMPG1Q17R60 797 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 PRICKLE4Q2TBC4 344 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SPDYAQ5MJ70 313 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 FAM47EQ6ZV65 393 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 TRIM46Q7Z4K8 759 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 TAGAPQ8N103 731 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 LRRC25Q8N386 305 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-205ENST00000595028 OR7G1Q8NGA0 311 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 C16orf78Q8WTQ4 265 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 MARVELD3Q96A59 401 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 CNRIP1Q96F85 164 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF681Q96N22 645 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 FAM173AQ9BQD7 235 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 TTTY12Q9BZ98 90 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SHCBP1LQ9BZQ2 653 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 BRINP2Q9C0B6 783 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 OR10A5Q9H207 317 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SH2D2AQ9NP31 389 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SLC17A7Q9P2U7 560 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 SUCOQ9UBS9 1254 aaKnown RBP13.93□□□□□ -0.18
TRIM28-205ENST00000595028 TINAGQ9UJW2 476 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF780BQ9Y6R6 833 aa13.93□□□□□ -0.18
TRIM28-205ENST00000595028 CCL21O00585 134 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 SPAG7O75391 227 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 GLSO94925 669 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-205ENST00000595028 P04436 131 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 ANXA4P09525 319 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-205ENST00000595028 ABOP16442 354 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 S1PR1P21453 382 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 GPX3P22352 226 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 DNASE1L1P49184 302 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 PLGLB1Q02325 96 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 BTKQ06187 659 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF844Q08AG5 666 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF763Q0D2J5 394 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 LTB4RQ15722 352 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 HLA-DQA1Q5Y7H0 255 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 CLEC6AQ6EIG7 209 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 FAM180BQ6P0A1 224 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 FAM111BQ6SJ93 734 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 RGS9BPQ6ZS82 235 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 FGD2Q7Z6J4 655 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 FBXW8Q8N3Y1 598 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 FAM13CQ8NE31 585 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 C17orf47Q8NEP4 570 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 OR10G3Q8NGC4 313 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF675Q8TD23 568 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 TCP10LQ8TDR4 215 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 PAQR8Q8TEZ7 354 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 TP53INP1Q96A56 240 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 EXOSC8Q96B26 276 aaKnown RBP13.92□□□□□ -0.18
TRIM28-205ENST00000595028 CTHRC1Q96CG8 243 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 CCDC120Q96HB5 630 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 SMC6Q96SB8 1091 aa13.92□□□□□ -0.18
TRIM28-205ENST00000595028 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-205ENST00000595028 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms