RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 A0A1B0GTL3 188 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 CTIFO43310 598 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 GUCY1B2O75343 617 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 SPAG7O75391 227 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 FAM58BPP0C7Q3 252 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 RNF4P78317 190 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 CSTF3Q12996 717 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF750Q32MQ0 723 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 CES4AQ5XG92 561 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 FRMD7Q6ZUT3 714 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 TRILQ7L0X0 811 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 C10orf107Q8IVU9 208 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 CLYBLQ8N0X4 340 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 TMEM251Q8N6I4 163 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 OR5L2Q8NGL0 311 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 TCP10LQ8TDR4 215 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 TANKQ92844 425 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 ZIM3Q96PE6 472 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 FAM111AQ96PZ2 611 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 TTYH2Q9BSA4 534 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 STMN4Q9H169 189 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 C12orf65Q9H3J6 166 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 RPF2Q9H7B2 306 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 VPS29Q9UBQ0 182 aa16.2■□□□□ 0.18
SHKBP1-203ENST00000594298 A0A0A6YYD5 115 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 C17orf105B2RV13 164 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 AQP7O14520 342 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 PROM1O43490 865 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 SUSD5O60279 629 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 EEDO75530 441 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 MAGEA5P43359 124 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 FOXO1Q12778 655 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 KRTAP21-3Q3LHN1 58 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 CCNYL2Q5T2Q4 361 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 OPN5Q6U736 354 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 METTL4Q8N3J2 472 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF321PQ8N8H1 164 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 OR5M9Q8NGP3 310 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 SLC2A12Q8TD20 617 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF717Q9BY31 904 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 OR8D2Q9GZM6 311 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 SSU72Q9NP77 194 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 FARSBQ9NSD9 589 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 SACM1LQ9NTJ5 587 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 FAM215AQ9Y5M1 114 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 LIPGQ9Y5X9 500 aa16.19■□□□□ 0.18
SHKBP1-203ENST00000594298 SERTM1A2A2V5 107 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 G3V3Y1 287 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF354AO60765 605 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 KLK1P06870 262 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 GLI4P10075 376 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 TNNI3P19429 210 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 TNFRSF17Q02223 184 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 PCLAFQ15004 111 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 MPEG1Q2M385 716 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 RTL6Q6ICC9 239 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 MRM1Q6IN84 353 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF585AQ6P3V2 769 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 B3GNT6Q6ZMB0 384 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 TMEM200AQ86VY9 491 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF721Q8TF20 911 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 PGM2Q96G03 612 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 MRPL1Q9BYD6 325 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 EML4Q9HC35 981 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 SLC17A7Q9P2U7 560 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 ATG4BQ9Y4P1 393 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 ASB4Q9Y574 426 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 ACTL7BQ9Y614 415 aa16.18■□□□□ 0.18
SHKBP1-203ENST00000594298 GOLGA6L10A6NI86 522 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 DYRK3O43781 588 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 TYROBPO43914 113 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 WDR1O75083 606 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 LDB3O75112 727 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 P04436 131 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 UROSP10746 265 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 COX7A2P14406 83 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 ALDH3A1P30838 453 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 ZFP36L2P47974 494 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 ART1P52961 327 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 MAPK12P53778 367 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 HNRNPH2P55795 449 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 PIGGQ5H8A4 983 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 BEND6Q5SZJ8 279 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 FAM47EQ6ZV65 393 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 OR10Q1Q8NGQ4 319 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 NUBPLQ8TB37 319 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 ANKRD9Q96BM1 317 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 SARAFQ96BY9 339 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 RBM18Q96H35 190 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 PELOQ9BRX2 385 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 GATA5Q9BWX5 397 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 SH2D2AQ9NP31 389 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 RYDENQ9NUL5 291 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 COPS7AQ9UBW8 275 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 TIMM22Q9Y584 194 aa16.17■□□□□ 0.18
SHKBP1-203ENST00000594298 HCFC1P51610 2035 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 A0A0G2JNJ9 132 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 MYOCOSA0A1B0GUC4 107 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 FAM47E-STBD1D6RA91 191 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 UBFD1O14562 309 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms