RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TLDC2A0PJX2 215 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 SERTM1A2A2V5 107 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 UBFD1O14562 309 aaKnown RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 TP53I11O14683 189 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 DRD2P14416 443 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 AGAP20933 346 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 PIGAP37287 484 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 MAGEA5P43359 124 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 TMED10P49755 219 aaKnown RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 NR0B1P51843 470 aaKnown RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 VSNL1P62760 191 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 ADORA2A-AS1P86434 159 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 IFFO1Q0D2I5 559 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 FOXO1Q12778 655 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 MAP4K2Q12851 820 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 HEPACAMQ14CZ8 416 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 NTRK2Q16620 822 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 PRICKLE4Q2TBC4 344 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 SPDYAQ5MJ70 313 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 C3P1Q6ZMU1 363 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 CD163Q86VB7 1156 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 C4orf33Q8N1A6 199 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 LRRC25Q8N386 305 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 FBXW8Q8N3Y1 598 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 FAM109AQ8N4B1 249 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 TMEM251Q8N6I4 163 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 ZNF441Q8N8Z8 693 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 C17orf47Q8NEP4 570 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 OR5M3Q8NGP4 307 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 APIPQ96GX9 242 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 IQCGQ9H095 443 aaKnown RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 PFDN4Q9NQP4 134 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 TUBA8Q9NY65 449 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 MID2Q9UJV3 735 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 UTS2RQ9UKP6 389 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 BOKQ9UMX3 212 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 ENTPD4Q9Y227 616 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 CFL2Q9Y281 166 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 DLGAP4Q9Y2H0 992 aa14.07□□□□□ -0.16
TRIM28-203ENST00000593582 CHCHD2Q9Y6H1 151 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.07□□□□□ -0.16
TRIM28-203ENST00000593582 IL3P08700 152 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 NUDT17P0C025 328 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 S1PR1P21453 382 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 TIA1P31483 386 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 GSTM5P46439 218 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 FOXA1P55317 472 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 RAE1P78406 368 aaKnown RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 SLC18A2Q05940 514 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 BTKQ06187 659 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 SLC10A1Q14973 349 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 RPS6KA2Q15349 733 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 IMPG1Q17R60 797 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 HYAL4Q2M3T9 481 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 PRAMEF20Q5VT98 475 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 LIPMQ5VYY2 423 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 SP5Q6BEB4 398 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 GALNT18Q6P9A2 607 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 SCIMPQ6UWF3 145 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 TMEM64Q6YI46 380 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 SAMD14Q8IZD0 417 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 RIBC1Q8N443 379 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 ADCY4Q8NFM4 1077 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 OR2W6PQ8NHA6 318 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 PHF10Q8WUB8 498 aaKnown RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 ADIPOR1Q96A54 375 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 CNRIP1Q96F85 164 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 C12orf65Q9H3J6 166 aaKnown RBP14.06□□□□□ -0.16
TRIM28-203ENST00000593582 MAT2BQ9NZL9 334 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 HEY2Q9UBP5 337 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 BCAP29Q9UHQ4 241 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 NPFFR2Q9Y5X5 522 aa14.06□□□□□ -0.16
TRIM28-203ENST00000593582 ATP6AP2A0A1C7CYW4 349 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 OR14I1A6ND48 311 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 ATP6AP2O75787 350 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 ANXA4P09525 319 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-203ENST00000593582 HTR1EP28566 365 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 RPP38P78345 283 aaKnown RBP14.05□□□□□ -0.16
TRIM28-203ENST00000593582 MGAT2Q10469 447 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 TBCELQ5QJ74 424 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 FAM180BQ6P0A1 224 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 EMBQ6PCB8 327 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 FAM111BQ6SJ93 734 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 C16orf78Q8WTQ4 265 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 DIO2Q92813 273 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 C11orf24Q96F05 449 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-203ENST00000593582 ZNF681Q96N22 645 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 DMRTA2Q96SC8 542 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 DOHHQ9BU89 302 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 EBPLQ9BY08 206 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 TP63Q9H3D4 680 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-203ENST00000593582 LDAHQ9H6V9 325 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 ZFP64Q9NPA5 681 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 CHST11Q9NPF2 352 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 GIMAP4Q9NUV9 329 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 SIRT5Q9NXA8 310 aa14.05□□□□□ -0.16
TRIM28-203ENST00000593582 NOTCH2Q04721 2471 aa14.04□□□□□ -0.16
TRIM28-203ENST00000593582 TEX15Q9BXT5 2789 aa14.04□□□□□ -0.16
TRIM28-203ENST00000593582 ANKRD33BA6NCL7 494 aa14.04□□□□□ -0.16
TRIM28-203ENST00000593582 NPIPA2E9PIF3 369 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms