RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ASIC3Q9UHC3 531 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 FBXL4Q9UKA2 621 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 IKZF3Q9UKT9 509 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 SH2B3Q9UQQ2 575 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 PDE10AQ9Y233 779 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CSAG2Q9Y5P2 127 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 TEX264Q9Y6I9 313 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 SPTAN1Q13813 2472 aaKnown RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 CNTRLQ7Z7A1 2325 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 SAC3D1A6NKF1 404 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 CAPN14A8MX76 684 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 TCP11X1B4DZS4 312 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 KIF2AO00139 706 aaPredicted RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 ZBTB14O43829 449 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 TTC4O95801 387 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 IGHEP01854 428 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 STATHP02808 62 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 EZRP15311 586 aaKnown RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 APOBEC3AP31941 199 aaPredicted RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 MAN2A2P49641 1150 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 TBPL1P62380 186 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 ABATP80404 500 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 RELAQ04206 551 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.06□□□□□ -1.28
VMP1-213ENST00000591877 AIMP2Q13155 320 aaKnown RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 NAA25Q14CX7 972 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 RPS6KA2Q15349 733 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 RBBP7Q16576 425 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 SYT16Q17RD7 645 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 TEDDM1Q5T9Z0 273 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 ATG9BQ674R7 924 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 STEAP4Q687X5 459 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 PRMT9Q6P2P2 845 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 IGFL2Q6UWQ7 119 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 Q6ZS92 163 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 VN1R4Q7Z5H5 301 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 CUZD1Q86UP6 607 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 KLHL7Q8IXQ5 586 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 CSNK1A1LQ8N752 337 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 C8orf44Q96CB5 159 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 SNRNP40Q96DI7 357 aaKnown RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 BOD1Q96IK1 185 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 CABS1Q96KC9 395 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 PRAP1Q96NZ9 151 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 TRIM51Q9BSJ1 452 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 ATG10Q9H0Y0 220 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 SERHL2Q9H4I8 314 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 TMEM184CQ9NVA4 438 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 ZNF282Q9UDV7 671 aaPredicted RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 TRMT6Q9UJA5 497 aaKnown RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 NXT1Q9UKK6 140 aaKnown RBP7.06□□□□□ -1.28
VMP1-213ENST00000591877 NTNG1Q9Y2I2 539 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 ICE1Q9Y2F5 2266 aa7.06□□□□□ -1.28
VMP1-213ENST00000591877 A0A087X0M5 115 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 A0A0A6YYC8 382 aaPredicted RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 A0A1B0GX30 115 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 A0A1W2PQ72 361 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 GAGE12BA1L429 117 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 GAGE12HA6NDE8 117 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 NPEPPSL1A6NEC2 478 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 F5H697 171 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 I3L1I5 382 aaPredicted RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 SLC16A5O15375 505 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TTI1O43156 1089 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 LCMT2O60294 686 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 SEC31AO94979 1220 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 CCNDBP1O95273 360 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TUBB4AP04350 444 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 RNF224P0DH78 156 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 FBLP22087 321 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 ITGA3P26006 1051 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 SLC26A3P40879 764 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 NR1H2P55055 460 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TIRAPP58753 221 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 GNG11P61952 73 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 CSNK1G2P78368 415 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 MAT1AQ00266 395 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 DR1Q01658 176 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 FHL3Q13643 280 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 FASTKD3Q14CZ7 662 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 MORF4L2Q15014 288 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 PDCD4Q53EL6 469 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 GARNL3Q5VVW2 1013 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 SP5Q6BEB4 398 aaPredicted RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 UGT3A1Q6NUS8 523 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 AGTRAPQ6RW13 159 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TMEM207Q6UWW9 146 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 PRSS41Q7RTY9 318 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 GDF7Q7Z4P5 450 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 ADCK2Q7Z695 626 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 GALNT7Q86SF2 657 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 C17orf53Q8N3J3 647 aaPredicted RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 MCOLN3Q8TDD5 553 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 PSMF1Q92530 271 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TM4SF19Q96DZ7 209 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 MMABQ96EY8 250 aaPredicted RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 LINGO1Q96FE5 620 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 C7orf26Q96N11 449 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 BARD1Q99728 777 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms