RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 HMOX2P30519 316 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 SSR4P51571 173 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 MAPK12P53778 367 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 RAE1P78406 368 aaKnown RBP10.38□□□□□ -0.75
SMAD4-211ENST00000590499 HMGCS1Q01581 520 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 LIPMQ5VYY2 423 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 SLC48A1Q6P1K1 146 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 GALNT18Q6P9A2 607 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 GALNTL5Q7Z4T8 443 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 C10orf107Q8IVU9 208 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 SIAH3Q8IW03 269 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 C9orf40Q8IXQ3 194 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 MMP21Q8N119 569 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 NUBPLQ8TB37 319 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 TM4SF18Q96CE8 201 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 RBM18Q96H35 190 aaKnown RBP10.38□□□□□ -0.75
SMAD4-211ENST00000590499 RASL10BQ96S79 203 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 LIN28AQ9H9Z2 209 aaKnown RBP10.38□□□□□ -0.75
SMAD4-211ENST00000590499 CXorf21Q9HAI6 301 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 NMRK1Q9NWW6 199 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 SIRT5Q9NXA8 310 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 MCM8Q9UJA3 840 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 MID2Q9UJV3 735 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 DNAJC13O75165 2243 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF407Q9C0G0 2248 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 ARHGAP10A1A4S6 786 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 C1orf226A1L170 272 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 WIPF3A6NGB9 483 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 WWP2O00308 870 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 OR10H2O60403 315 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 OR6B1O95007 311 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 AGFG2O95081 481 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 NADKO95544 446 aaPredicted RBP10.37□□□□□ -0.75
SMAD4-211ENST00000590499 SOX3P41225 446 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 SLC37A1P57057 533 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 TRA2BP62995 288 aaKnown RBP10.37□□□□□ -0.75
SMAD4-211ENST00000590499 ERVK-8P63133 956 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF844Q08AG5 666 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 IFFO1Q0D2I5 559 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 MPEG1Q2M385 716 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 MDGA2Q7Z553 956 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 GPALPP1Q8IXQ4 340 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 SRRM1Q8IYB3 904 aaKnown RBP10.37□□□□□ -0.75
SMAD4-211ENST00000590499 CYP4Z2PQ8N1L4 340 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 TMEM156Q8N614 296 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 CCDC63Q8NA47 563 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 OR4K14Q8NGD5 310 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 DOK4Q8TEW6 326 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 RIT1Q92963 219 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 TP53INP1Q96A56 240 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 APIPQ96GX9 242 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 ART5Q96L15 291 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 GATA5Q9BWX5 397 aaPredicted RBP10.37□□□□□ -0.75
SMAD4-211ENST00000590499 SLC17A7Q9P2U7 560 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 COPS7AQ9UBW8 275 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 ERRFI1Q9UJM3 462 aaPredicted RBP10.37□□□□□ -0.75
SMAD4-211ENST00000590499 ERVK-19Q9WJR5 959 aa10.37□□□□□ -0.75
SMAD4-211ENST00000590499 CCDC151A5D8V7 595 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 PCDH7O60245 1069 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 GUCY1B2O75343 617 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 LDLRP01130 860 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 STSP08842 583 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CT62P0C5K7 136 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CPMP14384 443 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CREB1P16220 341 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 PIK3R1P27986 724 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 TIA1P31483 386 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 SOX18P35713 384 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 XKP51811 444 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 KCNK10P57789 538 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 DUSP2Q05923 314 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 FUT7Q11130 342 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF267Q14586 743 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 EBPQ15125 230 aaKnown RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 MAPKAPK3Q16644 382 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF750Q32MQ0 723 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 SPIN4Q56A73 249 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 PIGGQ5H8A4 983 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CFAP157Q5JU67 520 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 SCIMPQ6UWF3 145 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CPSF7Q8N684 471 aaKnown RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF441Q8N8Z8 693 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 OR5L2Q8NGL0 311 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 TCP10LQ8TDR4 215 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 ASB15Q8WXK1 588 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 TMEM125Q96AQ2 219 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF681Q96N22 645 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 FAM111AQ96PZ2 611 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 TRMOQ9BU70 441 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CNPPD1Q9BV87 410 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 DEPPQ9NTK1 212 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 HEY2Q9UBP5 337 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 KLF13Q9Y2Y9 288 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CCL27Q9Y4X3 112 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 MAST4O15021 2626 aa10.36□□□□□ -0.75
SMAD4-211ENST00000590499 CENPEQ02224 2701 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 NINQ8N4C6 2090 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms