RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 COQ5Q5HYK3 327 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 PAGE3Q5JUK9 113 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 ATP1A1-AS1Q5TC04 95 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 REP15Q6BDI9 236 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 CCDC81Q6ZN84 652 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 RETREG3Q86VR2 466 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 PROSER1Q86XN7 944 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 B3GNT7Q8NFL0 401 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 OR7G2Q8NG99 324 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 OR1N1Q8NGS0 311 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF721Q8TF20 911 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 THAP4Q8WY91 577 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 NCLNQ969V3 563 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 MAGED4Q96JG8 741 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 IMMP1LQ96LU5 166 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 CXorf36Q9H7Y0 433 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 C3orf14Q9HBI5 128 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF160Q9HCG1 818 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 SIRT3Q9NTG7 399 aaPredicted RBP14.15□□□□□ -0.14
ATG4D-211ENST00000589753 DDX18Q9NVP1 670 aaKnown RBP14.15□□□□□ -0.14
ATG4D-211ENST00000589753 PTGFRNQ9P2B2 879 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 COPS7AQ9UBW8 275 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF639Q9UID6 485 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 VPS4AQ9UN37 437 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 PPIEQ9UNP9 301 aaKnown RBP14.15□□□□□ -0.14
ATG4D-211ENST00000589753 ERVK-11Q9UQG0 969 aa14.15□□□□□ -0.14
ATG4D-211ENST00000589753 A0A096LPI6 279 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 MRASO14807 208 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 EMC8O43402 210 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 PLOD3O60568 738 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 KCNH1O95259 989 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 ANP32DO95626 131 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 GSNP06396 782 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 ICAM2P13598 275 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 S1PR1P21453 382 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 SSTR4P31391 388 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 SOAT1P35610 550 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 CDKN2CP42773 168 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 GPR143P51810 404 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 TLE3Q04726 772 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 EXOSC7Q15024 291 aaKnown RBP14.14□□□□□ -0.15
ATG4D-211ENST00000589753 BTBD16Q32M84 506 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 SPDYE7PQ495Y7 208 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 FHL5Q5TD97 284 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 PLAG1Q6DJT9 500 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 DNAJC14Q6Y2X3 702 aaPredicted RBP14.14□□□□□ -0.15
ATG4D-211ENST00000589753 TMEM64Q6YI46 380 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 ZNF621Q6ZSS3 439 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 OR2L13Q8N349 312 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 DPP10Q8N608 796 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 TRIML2Q8N7C3 387 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 OR7G1Q8NGA0 311 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 DNAJB8Q8NHS0 232 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 FAM120BQ96EK7 910 aaKnown RBP14.14□□□□□ -0.15
ATG4D-211ENST00000589753 VMP1Q96GC9 406 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 FER1L6-AS2Q96M78 137 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 NPAS2Q99743 824 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 TRIM4Q9C037 500 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 ANKRA2Q9H9E1 313 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 ARL8BQ9NVJ2 186 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 BCAP29Q9UHQ4 241 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 TAGLN3Q9UI15 199 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 C19orf53Q9UNZ5 99 aaPredicted RBP14.14□□□□□ -0.15
ATG4D-211ENST00000589753 PCSK5Q92824 1860 aa14.14□□□□□ -0.15
ATG4D-211ENST00000589753 CCT8L1PA6NM43 557 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 TAF4O00268 1085 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 UPK1AO00322 258 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 PRAMEF2O60811 474 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 ERN1O75460 977 aaKnown RBP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 BCAS2O75934 225 aaPredicted RBP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 CBX7O95931 251 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 CLPSP04118 112 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 IGKV3-11P04433 115 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 UQCRC2P22695 453 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 CCT3P49368 545 aaKnown RBP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 PRR5P85299 388 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 NFYCQ13952 458 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 DCAF10Q5QP82 559 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 LRIF1Q5T3J3 769 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 RNF111Q6ZNA4 994 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 SZRD1Q7Z422 152 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 DHDDSQ86SQ9 333 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 AMER2Q8N7J2 671 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 ZNF321PQ8N8H1 164 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 PCYOX1LQ8NBM8 494 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 APCDD1LQ8NCL9 501 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 SIMC1Q8NDZ2 872 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 OR52R1Q8NGF1 315 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 OR56A1Q8NGH5 318 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 OR5AK3PQ8NH89 298 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 M1APQ8TC57 530 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 SFXN5Q8TD22 340 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 MOAP1Q96BY2 351 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 RCN3Q96D15 328 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 SLC35A5Q9BS91 424 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 NUDT9Q9BW91 350 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 SEMA4CQ9C0C4 833 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 PAIP1Q9H074 479 aaKnown RBP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 OR10A5Q9H207 317 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms