RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LRRC14BA6NHZ5 514 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 EIF3HO15372 352 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCDC43-204ENST00000588687 ACSL3O95573 720 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 IL2RAP01589 272 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 LTA4HP09960 611 aaKnown RBP16.82■□□□□ 0.28
CCDC43-204ENST00000588687 BMP7P18075 431 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 PTPN6P29350 595 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 HOXC12P31275 282 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 KBTBD12Q3ZCT8 623 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 EIPR1Q53HC9 387 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 LIPJQ5W064 366 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 OR52E8Q6IFG1 317 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 C9orf106Q8NAJ2 232 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 C17orf47Q8NEP4 570 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 LRRC46Q96FV0 321 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 TMEM41AQ96HV5 264 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 SMR3AQ99954 134 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 CENPKQ9BS16 269 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 NMRAL1Q9HBL8 299 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 WHRNQ9P202 907 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 PCDHGA11Q9Y5H2 935 aa16.82■□□□□ 0.28
CCDC43-204ENST00000588687 TP53I11O14683 189 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 PGRMC2O15173 223 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 UGDHO60701 494 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 IL18BPO95998 194 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 HRGP04196 525 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 DRD2P14416 443 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 S1PR1P21453 382 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 PTX3P26022 381 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-204ENST00000588687 SPRP35270 261 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-204ENST00000588687 AGFG1P52594 562 aaKnown RBP16.81■□□□□ 0.28
CCDC43-204ENST00000588687 NAGLUP54802 743 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 IRF9Q00978 393 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 GRTP1Q5TC63 336 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 C3orf62Q6ZUJ4 267 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 ADGRE4PQ86SQ3 457 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 NUDT13Q86X67 352 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 GALNT12Q8IXK2 581 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 L3MBTL4Q8NA19 623 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 RHEBL1Q8TAI7 183 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 LINC01560Q8TB33 94 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 KCTD4Q8WVF5 259 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 NXNL1Q96CM4 212 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 TRIB1Q96RU8 372 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 EPB41L4BQ9H329 900 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 PSD3Q9NYI0 1048 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 FETUBQ9UGM5 382 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 EDARQ9UNE0 448 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 CAMK2AQ9UQM7 478 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 SAR1BQ9Y6B6 198 aa16.81■□□□□ 0.28
CCDC43-204ENST00000588687 HMX2A2RU54 273 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 CLCA1A8K7I4 914 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 TRAPPC6AO75865 159 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 GOSR1O95249 250 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 GBAP04062 536 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 GSTA2P09210 222 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 CD53P19397 219 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 GPX3P22352 226 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 CTSSP25774 331 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 ABCD3P28288 659 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 PTGDSP41222 190 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 SLCO1A2P46721 670 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 TMED10P49755 219 aaKnown RBP16.8■□□□□ 0.28
CCDC43-204ENST00000588687 WIPI1Q5MNZ9 446 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-204ENST00000588687 TIGD3Q6B0B8 471 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 DESI1Q6ICB0 168 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 TMEM81Q6P7N7 255 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 RAPH1Q70E73 1250 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 TBC1D1Q86TI0 1168 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-204ENST00000588687 MYLK4Q86YV6 388 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-204ENST00000588687 MED12LQ86YW9 2145 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 CTAGE3PQ8IX95 158 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 PRR22Q8IZ63 422 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 FAM83FQ8NEG4 500 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-204ENST00000588687 ERP44Q9BS26 406 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 G6PC3Q9BUM1 346 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 NXF5Q9H1B4 397 aaKnown RBP16.8■□□□□ 0.28
CCDC43-204ENST00000588687 DPH5Q9H2P9 285 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 ACTR8Q9H981 624 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 CALHM2Q9HA72 323 aa16.8■□□□□ 0.28
CCDC43-204ENST00000588687 JMJD1CQ15652 2540 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 TLN2Q9Y4G6 2542 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 CAPN14A8MX76 684 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 EEF1E1-BLOC1S5C9J1V9 151 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 FOXE1O00358 373 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-204ENST00000588687 EEF1E1O43324 174 aaKnown RBP16.79■□□□□ 0.28
CCDC43-204ENST00000588687 SEMA3DO95025 777 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 ABCB1P08183 1280 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-204ENST00000588687 CRABP2P29373 138 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 MASP1P48740 699 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 NEK2P51955 445 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 FOXF2Q12947 444 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 PCBP2Q15366 365 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC43-204ENST00000588687 CPSF6Q16630 551 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC43-204ENST00000588687 CYP20A1Q6UW02 462 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 GOLGA7Q7Z5G4 137 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 BIVMQ86UB2 503 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 PACS2Q86VP3 889 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 KIF18BQ86Y91 864 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms