RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	GPC6	Q9Y625	555 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-223	ENST00000588516	OTOGL	Q3ZCN5	2332 aa		13.3	□□□□□ -0.28
NEDD4L-223	ENST00000588516	CHD8	Q9HCK8	2581 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516		H3BN98	237 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	AQP9	O43315	295 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	PTH	P01270	115 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TNFRSF1B	P20333	461 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	ELAVL4	P26378	380 aa	Known RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	GSS	P48637	474 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	RORC	P51449	518 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	LIMK1	P53667	647 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	MEF2A	Q02078	507 aa	Predicted RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	MLLT11	Q13015	90 aa	Predicted RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TDG	Q13569	410 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	GANAB	Q14697	944 aa	Known RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TST	Q16762	297 aa	Known RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	MFSD4B	Q5TF39	518 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516		Q6ZPB1	254 aa	Predicted RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	C11orf96	Q7Z7L8	435 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	CYP4Z2P	Q8N1L4	340 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	FAM26E	Q8N5C1	309 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TOR1AIP2	Q8NFQ8	470 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	OR5AR1	Q8NGP9	310 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	APOBEC4	Q8WW27	367 aa	Known RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TXNDC15	Q96J42	360 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	ZSWIM3	Q96MP5	696 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	F2RL3	Q96RI0	385 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	BBS4	Q96RK4	519 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	CHCHD6	Q9BRQ6	235 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	RHNO1	Q9BSD3	238 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TIMM29	Q9BSF4	260 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	CDADC1	Q9BWV3	514 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TMEM245	Q9H330	911 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	MTG2	Q9H4K7	406 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	ANKRD19P	Q9H560	264 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	MVB12B	Q9H7P6	319 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	LIPT1	Q9Y234	373 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	HCFC2	Q9Y5Z7	792 aa		13.29	□□□□□ -0.28
NEDD4L-223	ENST00000588516	LRRK1	Q38SD2	2015 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	WDR87	Q6ZQQ6	2873 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	GSAP	A4D1B5	854 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	PRAMEF25	A6NGN4	478 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SYT5	O00445	386 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	MYL12B	O14950	172 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	OR1F1	O43749	312 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	KIAA0513	O60268	411 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	NME6	O75414	186 aa	Predicted RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	AGR2	O95994	175 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	AHR	P35869	848 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SSR2	P43308	183 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SMS	P52788	366 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	NUDT6	P53370	316 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	PRR5	P85299	388 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	CDK3	Q00526	305 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TP53BP2	Q13625	1128 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	ZNF234	Q14588	700 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SLC9A5	Q14940	896 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SPHAR	Q15513	63 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	DUSP7	Q16829	419 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	C12orf76	Q8N812	135 aa	Predicted RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	ZNF740	Q8NDX6	193 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SUN3	Q8TAQ9	357 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	OTUB1	Q96FW1	271 aa	Predicted RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	SLC30A2	Q9BRI3	323 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	TAPBPL	Q9BX59	468 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	C1QTNF7	Q9BXJ2	289 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	PINK1	Q9BXM7	581 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	KLHL25	Q9H0H3	589 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	AMBN	Q9NP70	447 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	NCDN	Q9UBB6	729 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	REV1	Q9UBZ9	1251 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	RALY	Q9UKM9	306 aa	Known RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	STUB1	Q9UNE7	303 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	GRIP1	Q9Y3R0	1128 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	PCDHGB6	Q9Y5F9	930 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	HEBP2	Q9Y5Z4	205 aa		13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	CFAP20	Q9Y6A4	193 aa	Known RBP	13.28	□□□□□ -0.28
NEDD4L-223	ENST00000588516	ATRX	P46100	2492 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516		J3KTA2	159 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516		K7ESM1	405 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HMGN4	O00479	90 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SNPH	O15079	494 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ASNA1	O43681	348 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ENTPD6	O75354	484 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RAB36	O95755	333 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DLGAP3	O95886	979 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ADH1B	P00325	375 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SP9	P0CG40	484 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	POU2F1	P14859	743 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ALOX12	P18054	663 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MYL12A	P19105	171 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RAB28	P51157	221 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	IFITM3	Q01628	133 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PRDX1	Q06830	199 aa	Known RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HSPB3	Q12988	150 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KRT33B	Q14525	404 aa		13.27	□□□□□ -0.29

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