RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 UTS2RQ9UKP6 389 aa18.03■□□□□ 0.48
TPM4-208ENST00000588410 CFL2Q9Y281 166 aa18.03■□□□□ 0.48
TPM4-208ENST00000588410 DLGAP4Q9Y2H0 992 aa18.03■□□□□ 0.48
TPM4-208ENST00000588410 KLF2Q9Y5W3 355 aaPredicted RBP18.03■□□□□ 0.48
TPM4-208ENST00000588410 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.03■□□□□ 0.48
TPM4-208ENST00000588410 SPTBN1Q01082 2364 aaKnown RBP18.03■□□□□ 0.48
TPM4-208ENST00000588410 UBFD1O14562 309 aaKnown RBP18.02■□□□□ 0.48
TPM4-208ENST00000588410 TP53I11O14683 189 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 ATP1B1P05026 303 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 IL3P08700 152 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 TMED10P49755 219 aaKnown RBP18.02■□□□□ 0.48
TPM4-208ENST00000588410 VSNL1P62760 191 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 ADORA2A-AS1P86434 159 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 HEPACAMQ14CZ8 416 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 PRAMEF20Q5VT98 475 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 FRMD7Q6ZUT3 714 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 SAMD14Q8IZD0 417 aaPredicted RBP18.02■□□□□ 0.48
TPM4-208ENST00000588410 LRRC25Q8N386 305 aaPredicted RBP18.02■□□□□ 0.48
TPM4-208ENST00000588410 TMEM251Q8N6I4 163 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 ZNF615Q8N8J6 731 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 ZNF441Q8N8Z8 693 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 OR10G3Q8NGC4 313 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 C12orf65Q9H3J6 166 aaKnown RBP18.02■□□□□ 0.48
TPM4-208ENST00000588410 ZDHHC11Q9H8X9 412 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 PLSCR2Q9NRY7 297 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 GIMAP4Q9NUV9 329 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 OXSMQ9NWU1 459 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 BOKQ9UMX3 212 aaPredicted RBP18.02■□□□□ 0.48
TPM4-208ENST00000588410 ENTPD4Q9Y227 616 aa18.02■□□□□ 0.48
TPM4-208ENST00000588410 ICE1Q9Y2F5 2266 aa18.02■□□□□ 0.47
TPM4-208ENST00000588410 SVILO95425 2214 aa18.02■□□□□ 0.47
TPM4-208ENST00000588410 ATP6AP2A0A1C7CYW4 349 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 SERTM1A2A2V5 107 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 ATP6AP2O75787 350 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 AGAP20933 346 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 TIA1P31483 386 aaKnown RBP eCLIP18.01■□□□□ 0.471e-15■■□□□ 12.8
TPM4-208ENST00000588410 MAGEA5P43359 124 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 FOXA1P55317 472 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 RPP38P78345 283 aaKnown RBP18.01■□□□□ 0.47
TPM4-208ENST00000588410 MAP4K2Q12851 820 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 SLC10A1Q14973 349 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 NTRK2Q16620 822 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 PRICKLE4Q2TBC4 344 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 FAM111BQ6SJ93 734 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 TMEM64Q6YI46 380 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 RIBC1Q8N443 379 aaPredicted RBP18.01■□□□□ 0.47
TPM4-208ENST00000588410 OR2W6PQ8NHA6 318 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 C16orf78Q8WTQ4 265 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 PHF10Q8WUB8 498 aaKnown RBP18.01■□□□□ 0.47
TPM4-208ENST00000588410 JSRP1Q96MG2 331 aaPredicted RBP18.01■□□□□ 0.47
TPM4-208ENST00000588410 LDAHQ9H6V9 325 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 EXO5Q9H790 373 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 SH2D2AQ9NP31 389 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 MAT2BQ9NZL9 334 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 HEY2Q9UBP5 337 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 NPFFR2Q9Y5X5 522 aa18.01■□□□□ 0.47
TPM4-208ENST00000588410 ANXA4P09525 319 aaPredicted RBP18■□□□□ 0.47
TPM4-208ENST00000588410 HTR1EP28566 365 aa18■□□□□ 0.47
TPM4-208ENST00000588410 GSTM5P46439 218 aa18■□□□□ 0.47
TPM4-208ENST00000588410 RAE1P78406 368 aaKnown RBP18■□□□□ 0.47
TPM4-208ENST00000588410 SLC18A2Q05940 514 aa18■□□□□ 0.47
TPM4-208ENST00000588410 FOXO1Q12778 655 aa18■□□□□ 0.47
TPM4-208ENST00000588410 RPS6KA2Q15349 733 aa18■□□□□ 0.47
TPM4-208ENST00000588410 HYAL4Q2M3T9 481 aa18■□□□□ 0.47
TPM4-208ENST00000588410 TBCELQ5QJ74 424 aa18■□□□□ 0.47
TPM4-208ENST00000588410 LIPMQ5VYY2 423 aa18■□□□□ 0.47
TPM4-208ENST00000588410 FAM180BQ6P0A1 224 aa18■□□□□ 0.47
TPM4-208ENST00000588410 C17orf47Q8NEP4 570 aa18■□□□□ 0.47
TPM4-208ENST00000588410 ADCY4Q8NFM4 1077 aa18■□□□□ 0.47
TPM4-208ENST00000588410 CDC26Q8NHZ8 85 aa18■□□□□ 0.47
TPM4-208ENST00000588410 DIO2Q92813 273 aa18■□□□□ 0.47
TPM4-208ENST00000588410 EXOSC8Q96B26 276 aaKnown RBP18■□□□□ 0.47
TPM4-208ENST00000588410 CNRIP1Q96F85 164 aaPredicted RBP18■□□□□ 0.47
TPM4-208ENST00000588410 SMC6Q96SB8 1091 aa18■□□□□ 0.47
TPM4-208ENST00000588410 DOHHQ9BU89 302 aa18■□□□□ 0.47
TPM4-208ENST00000588410 EBPLQ9BY08 206 aa18■□□□□ 0.47
TPM4-208ENST00000588410 SHCBP1LQ9BZQ2 653 aa18■□□□□ 0.47
TPM4-208ENST00000588410 TP63Q9H3D4 680 aaPredicted RBP18■□□□□ 0.47
TPM4-208ENST00000588410 ZFP64Q9NPA5 681 aa18■□□□□ 0.47
TPM4-208ENST00000588410 CHST11Q9NPF2 352 aa18■□□□□ 0.47
TPM4-208ENST00000588410 RRAGDQ9NQL2 400 aaPredicted RBP18■□□□□ 0.47
TPM4-208ENST00000588410 B4GALT7Q9UBV7 327 aa18■□□□□ 0.47
TPM4-208ENST00000588410 CHCHD2Q9Y6H1 151 aaPredicted RBP18■□□□□ 0.47
TPM4-208ENST00000588410 NPIPA2E9PIF3 369 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 NPIPA3F8WFD2 350 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 HNRNPRO43390 633 aaKnown RBP17.99■□□□□ 0.47
TPM4-208ENST00000588410 LRATO95237 230 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 SLU7O95391 586 aaKnown RBP17.99■□□□□ 0.47
TPM4-208ENST00000588410 IGHG3P01860 377 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 NUDT17P0C025 328 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 S1PR1P21453 382 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 GPX3P22352 226 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 FBXW4P57775 412 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 MGAT2Q10469 447 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 EXOSC7Q15024 291 aaKnown RBP17.99■□□□□ 0.47
TPM4-208ENST00000588410 TMEM211Q6ICI0 200 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 GALNT18Q6P9A2 607 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 EMBQ6PCB8 327 aa17.99■□□□□ 0.47
TPM4-208ENST00000588410 NCCRP1Q6ZVX7 275 aaPredicted RBP17.99■□□□□ 0.47
TPM4-208ENST00000588410 CCDC116Q8IYX3 515 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms