RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 A0A0A6YYD5 115 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 C2orf92A0A1B0GVN3 265 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 SYNDIG1LA6NDD5 238 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 GNB5O14775 395 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 OR10H2O60403 315 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 AIFM1O95831 613 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 BMP7P18075 431 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 TIMP3P35625 211 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 PLIN5Q00G26 463 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 PCDH1Q08174 1060 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 FOXF2Q12947 444 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 DAZAP2Q15038 168 aaPredicted RBP10.63□□□□□ -0.71
LIG3-207ENST00000586119 POU4F3Q15319 338 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 CPSF6Q16630 551 aaKnown RBP eCLIP10.63□□□□□ -0.71
LIG3-207ENST00000586119 SPRED3Q2MJR0 410 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 KBTBD12Q3ZCT8 623 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 TMEM198Q66K66 360 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 EMBQ6PCB8 327 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 RAPH1Q70E73 1250 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 YRDCQ86U90 279 aaKnown RBP10.63□□□□□ -0.71
LIG3-207ENST00000586119 ZCCHC7Q8N3Z6 543 aaKnown RBP10.63□□□□□ -0.71
LIG3-207ENST00000586119 C9orf106Q8NAJ2 232 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 SIMC1Q8NDZ2 872 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 SPPL2AQ8TCT8 520 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 FAM222BQ8WU58 562 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 KCTD4Q8WVF5 259 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 UBE2E3Q969T4 207 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 ADIPOR1Q96A54 375 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 WDYHV1Q96HA8 205 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 RILPQ96NA2 401 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 TRIB1Q96RU8 372 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 UGT2B28Q9BY64 529 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 PARD6BQ9BYG5 372 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 TXLNGYQ9BZA5 131 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 UBQLN3Q9H347 655 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 CDC42EP4Q9H3Q1 356 aaKnown RBP10.63□□□□□ -0.71
LIG3-207ENST00000586119 PLEKHF2Q9H8W4 249 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 QPCTLQ9NXS2 382 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 NINJ2Q9NZG7 142 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 DTX4Q9Y2E6 619 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 RNF11Q9Y3C5 154 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 NPFFR2Q9Y5X5 522 aa10.63□□□□□ -0.71
LIG3-207ENST00000586119 HEATR5AQ86XA9 2040 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 DVL2O14641 736 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 ATE1O95260 518 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 SIX3O95343 332 aaPredicted RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 IL2RAP01589 272 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 HPNP05981 417 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 ABHD2P08910 425 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 FAM58BPP0C7Q3 252 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 EPXP11678 715 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 EPB42P16452 691 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 TLX1P31314 330 aaPredicted RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 CASP3P42574 277 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 CDK9P50750 372 aaKnown RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 NAGLUP54802 743 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 VSNL1P62760 191 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 TOMM20Q15388 145 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 NNATQ16517 81 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 FBXL19-AS1Q494R0 122 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 GRTP1Q5TC63 336 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 VASNQ6EMK4 673 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 PAMR1Q6UXH9 720 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 CENPLQ8N0S6 344 aaPredicted RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 ZNF615Q8N8J6 731 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 UBTD2Q8WUN7 234 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 SLC44A1Q8WWI5 657 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 NTNG2Q96CW9 530 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 MRRFQ96E11 262 aaKnown RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 ART5Q96L15 291 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 ZNF597Q96LX8 424 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 CDK15Q96Q40 435 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 ANGPTL4Q9BY76 406 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 DDX31Q9H8H2 851 aaKnown RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 CXorf21Q9HAI6 301 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 TEX10Q9NXF1 929 aaPredicted RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 MS4A12Q9NXJ0 267 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 TXNDC16Q9P2K2 825 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.62□□□□□ -0.71
LIG3-207ENST00000586119 PHF11Q9UIL8 331 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
LIG3-207ENST00000586119 V9GYY5 206 aaPredicted RBP10.62□□□□□ -0.71
LIG3-207ENST00000586119 DNHD1Q96M86 4753 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 HMX2A2RU54 273 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 ANKRD33BA6NCL7 494 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 TUBAL3A6NHL2 446 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 FAM47E-STBD1D6RA91 191 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 DYRK3O43781 588 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 KERAO60938 352 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 LTA4HP09960 611 aaKnown RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 FAM153BP0C7A2 387 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 SLC35E2P0CK97 266 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 NR2F6P10588 404 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 S1PR1P21453 382 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 PTX3P26022 381 aaPredicted RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 SPRP35270 261 aaPredicted RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 PTGDSP41222 190 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 BUD31P41223 144 aaPredicted RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 PIK3CBP42338 1070 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 BIKQ13323 160 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms