RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 LRTM1Q9HBL6 345 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 MYNNQ9NPC7 610 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 SLC35C2Q9NQQ7 365 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 MAT2BQ9NZL9 334 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 BCAP29Q9UHQ4 241 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 ERRFI1Q9UJM3 462 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 POLR3HQ9Y535 204 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 ACOT7O00154 380 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 ASNA1O43681 348 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 BCAS2O75934 225 aaPredicted RBP25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 CHRNGP07510 517 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 ETV4P43268 484 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 TMED10P49755 219 aaKnown RBP25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF791Q3KP31 576 aaPredicted RBP25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 SLC22A10Q63ZE4 541 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 SIAH3Q8IW03 269 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 GHDCQ8N2G8 530 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 ERP27Q96DN0 273 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 MAGED4Q96JG8 741 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 FAM173AQ9BQD7 235 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 PRODH2Q9UF12 536 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 TMED5Q9Y3A6 229 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 CCL27Q9Y4X3 112 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 DNAJC15Q9Y5T4 150 aa25.1■■□□□ 1.61
SMARCD2-210ENST00000584400 LRRTM2O43300 516 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 NADKO95544 446 aaPredicted RBP25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 SERPINB4P48594 390 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 NR0B1P51843 470 aaKnown RBP25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 PLGLB1Q02325 96 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 SH2D4BQ5SQS7 431 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 FAM47EQ6ZV65 393 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 CCDC116Q8IYX3 515 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 OR2M7Q8NG81 312 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF675Q8TD23 568 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 TWIST2Q8WVJ9 160 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 CTHRC1Q96CG8 243 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 CCT7Q99832 543 aa25.09■■□□□ 1.61
SMARCD2-210ENST00000584400 BIRC5O15392 142 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF354AO60765 605 aaPredicted RBP25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 ZWINTO95229 277 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 FBXO45P0C2W1 286 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 MGAT2Q10469 447 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 CEBPEQ15744 281 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 FAM111BQ6SJ93 734 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 ZCCHC23Q6ZST2 131 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 DDIASQ8IXT1 998 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF441Q8N8Z8 693 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 BBS4Q96RK4 519 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 TSPAN10Q9H1Z9 355 aaPredicted RBP25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 CNIH4Q9P003 139 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF639Q9UID6 485 aa25.08■■□□□ 1.61
SMARCD2-210ENST00000584400 TP53I11O14683 189 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 SNUPNO95149 360 aaKnown RBP25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 LINC00032P0C843 101 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 S1PR1P21453 382 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 DCAF7P61962 342 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 RPP38P78345 283 aaKnown RBP25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 KIAA0040Q15053 153 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 TNFAIP8L3Q5GJ75 292 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 FAM71E1Q6IPT2 247 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 FAM180BQ6P0A1 224 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 PAOXQ6QHF9 649 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 Q6ZSR9 355 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 SLC22A16Q86VW1 577 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 TICAM1Q8IUC6 712 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 ADCY4Q8NFM4 1077 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 PAQR8Q8TEZ7 354 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 RELTQ969Z4 430 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 KCNK9Q9NPC2 374 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 TAS2R7Q9NYW3 318 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 ESPL1Q14674 2120 aa25.07■■□□□ 1.6
SMARCD2-210ENST00000584400 TRGV8A0A0C4DH27 118 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 WIPF3A6NGB9 483 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 SLC19A2O60779 497 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 SLITRK5O94991 958 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 LDLRP01130 860 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 NTRK2Q16620 822 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 RNFT1Q5M7Z0 435 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 LYPD8Q6UX82 237 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 FAM9CQ8IZT9 166 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 FAM13CQ8NE31 585 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 ADIPOR1Q96A54 375 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 PPP3R2Q96LZ3 170 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 PSMG3-AS1Q96PY0 264 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 DEPPQ9NTK1 212 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 NPFFR2Q9Y5X5 522 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 RELNP78509 3460 aa25.06■■□□□ 1.6
SMARCD2-210ENST00000584400 CCL3P10147 92 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 GPX3P22352 226 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 NTSP30990 170 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 DUSP2Q05923 314 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 ZNF628Q5EBL2 1059 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 TBCELQ5QJ74 424 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 C1QL3Q5VWW1 255 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 MTFR2Q6P444 385 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 SPPL2CQ8IUH8 684 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 OR52R1Q8NGF1 315 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 OR6Y1Q8NGX8 325 aa25.05■■□□□ 1.6
SMARCD2-210ENST00000584400 AGR3Q8TD06 166 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms