RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PIGGQ5H8A4 983 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 FRG2Q64ET8 278 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 C18orf63Q68DL7 685 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 TTC19Q6DKK2 380 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 OR52E8Q6IFG1 317 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 MRM1Q6IN84 353 aaKnown RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 FAM47EQ6ZV65 393 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 SLC29A4Q7RTT9 530 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 PAGE2Q7Z2X7 111 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 FGD2Q7Z6J4 655 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 NOA1Q8NC60 698 aaKnown RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 OR52N2Q8NGI0 321 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 SREK1Q8WXA9 508 aaKnown RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 FRG2BQ96QU4 278 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 MRPL57Q9BQC6 102 aaKnown RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 TTTY12Q9BZ98 90 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 TP63Q9H3D4 680 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 ZDHHC11Q9H8X9 412 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 IL1RL2Q9HB29 575 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 DEPPQ9NTK1 212 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 AHSPQ9NZD4 102 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 PCTPQ9UKL6 214 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 ASB4Q9Y574 426 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 DOCK7Q96N67 2140 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 ABCA1O95477 2261 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 IQANK1A0A1B0GTG1 560 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 A0A1W2PR48 441 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 OR6C76A6NM76 312 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 FAM166BA8MTA8 275 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 TRIM49D1C9J1S8 452 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 OR7A17O14581 309 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 TMPRSS11DO60235 418 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 EEDO75530 441 aaKnown RBP10.25□□□□□ -0.77
CCDC47-206ENST00000584112 PDE9AO76083 593 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 NEK2P51955 445 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 HERVK_113P63132 956 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 ERVK-8P63133 956 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 KRTAP1-1Q07627 177 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 GGTA1PQ4G0N0 100 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 UBAP2Q5T6F2 1119 aaKnown RBP10.25□□□□□ -0.77
CCDC47-206ENST00000584112 LGSNQ5TDP6 509 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 C6orf163Q5TEZ5 329 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 SLC22A10Q63ZE4 541 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 RNF111Q6ZNA4 994 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 C9orf40Q8IXQ3 194 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 FAM109AQ8N4B1 249 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 MYRIPQ8NFW9 859 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 OR52B6Q8NGF0 335 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 DCAKDQ8WVC6 231 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 ASB5Q8WWX0 329 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 RIT1Q92963 219 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 PPWD1Q96BP3 646 aaKnown RBP10.25□□□□□ -0.77
CCDC47-206ENST00000584112 SPACA9Q96E40 222 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-206ENST00000584112 CDK15Q96Q40 435 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 CNPPD1Q9BV87 410 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 ERVK-6Q9BXR3 956 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 DEFB127Q9H1M4 99 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 MRPL46Q9H2W6 279 aaKnown RBP10.25□□□□□ -0.77
CCDC47-206ENST00000584112 ADAM29Q9UKF5 820 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 ERVK-19Q9WJR5 959 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 MPDZO75970 2070 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 USF3Q68DE3 2245 aa10.25□□□□□ -0.77
CCDC47-206ENST00000584112 A0A0G2JMM0 328 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 EXOC1LA0A1B0GW35 172 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 A0A1W2PPB8 328 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 A0A1W2PRS3 328 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 PINLYPA6NC86 204 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 OR14I1A6ND48 311 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 GLOD5A6NK44 160 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 KIR3DP1A8MWS1 328 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 G3V3Y1 287 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 GUCY1B2O75343 617 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 PRKRAO75569 313 aaKnown RBP10.24□□□□□ -0.77
CCDC47-206ENST00000584112 GLSO94925 669 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-206ENST00000584112 AIFM1O95831 613 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 OTCP00480 354 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 RPS17P08708 135 aaKnown RBP10.24□□□□□ -0.77
CCDC47-206ENST00000584112 ABHD2P08910 425 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 SNRPAP09012 282 aaKnown RBP10.24□□□□□ -0.77
CCDC47-206ENST00000584112 SLC35E2P0CK97 266 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 CCL3P10147 92 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 PIK3R1P27986 724 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 ECHS1P30084 290 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 SLC37A1P57057 533 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 TRAF3Q13114 568 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 ZNF267Q14586 743 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-206ENST00000584112 HYAL4Q2M3T9 481 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 ACAD11Q709F0 780 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 MILR1Q7Z6M3 343 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 LCA5Q86VQ0 697 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 TAGAPQ8N103 731 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 CNPY4Q8N129 248 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 MTBPQ96DY7 904 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 GAL3ST4Q96RP7 486 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 SMC6Q96SB8 1091 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 WWTR1Q9GZV5 400 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 ELOVL6Q9H5J4 265 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 SEMA4BQ9NPR2 832 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-206ENST00000584112 NMRK1Q9NWW6 199 aa10.24□□□□□ -0.77
CCDC47-206ENST00000584112 CNIH4Q9P003 139 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms