RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IFNA16P05015 189 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 UMODP07911 640 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 UQCRC2P22695 453 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 F8A1P23610 371 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PTGER1P34995 402 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 GPC1P35052 558 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 DLSTP36957 453 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 SLC25A3Q00325 362 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 DNASE1L3Q13609 305 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 LTB4RQ15722 352 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PRICKLE4Q2TBC4 344 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 TRMT5Q32P41 509 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 GTDC1Q4AE62 458 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 RUNDC3AQ59EK9 446 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 FAM69BQ5VUD6 431 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 C8orf82Q6P1X6 216 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 ANKRD37Q7Z713 158 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 MSRB3Q8IXL7 192 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 RBM15BQ8NDT2 890 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 ZNF675Q8TD23 568 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 METTL21AQ8WXB1 218 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 RIT1Q92963 219 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 CTHRC1Q96CG8 243 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 CGREF1Q99674 301 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 HOPXQ9BPY8 73 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 GPATCH1Q9BRR8 931 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 CRB3Q9BUF7 120 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 CXorf21Q9HAI6 301 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 NEUROD4Q9HD90 331 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PNO1Q9NRX1 252 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 SEMA3GQ9NS98 782 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 SLC25A37Q9NYZ2 338 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 VAPAQ9P0L0 249 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 TCFL5Q9UL49 500 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 VPS4AQ9UN37 437 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PADI2Q9Y2J8 665 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 NUP210LQ5VU65 1888 aa15.28■□□□□ 0.04
CDK5RAP3-228ENST00000583363 CFAP46Q8IYW2 2715 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 FXYD1O00168 92 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 SLITRK5O94991 958 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 IGHEP01854 428 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 IFI6P09912 130 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 CT62P0C5K7 136 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 TNNI3P19429 210 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PTPN4P29074 926 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 FOLR3P41439 243 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 RASSF2P50749 326 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 MXRA7P84157 204 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 SSPNQ14714 243 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 FAAH2Q6GMR7 532 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 FAM111BQ6SJ93 734 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 TMEM64Q6YI46 380 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 LANCL3Q6ZV70 420 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 TRIML2Q8N7C3 387 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 DOK4Q8TEW6 326 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 ZFP90Q8TF47 636 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PTPMT1Q8WUK0 201 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 KAT2AQ92830 837 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 ANKRD27Q96NW4 1050 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 BTBD10Q9BSF8 475 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 EPS8L2Q9H6S3 715 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 ADAP2Q9NPF8 381 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 MAT2BQ9NZL9 334 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 NTMQ9P121 344 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 ZNF639Q9UID6 485 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 PCDHGA6Q9Y5G7 932 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 SNX8Q9Y5X2 465 aa15.27■□□□□ 0.04
CDK5RAP3-228ENST00000583363 AHCTF1Q8WYP5 2266 aa15.27■□□□□ 0.03
CDK5RAP3-228ENST00000583363 A0A087WV62 115 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 A8MUA0 341 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 EMC8O43402 210 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PLOD3O60568 738 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 LIPCP11150 499 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 S1PR1P21453 382 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CCT3P49368 545 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR4D2P58180 307 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PSME3P61289 254 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CAPRIN1Q14444 709 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ELAVL1Q15717 326 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TBC1D25Q3MII6 688 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TRMT12Q53H54 448 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 FHL5Q5TD97 284 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NANOGP8Q6NSW7 305 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TMEM107Q6UX40 140 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C16orf89Q6UX73 402 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DNAJC14Q6Y2X3 702 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PGAM4Q8N0Y7 254 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CLEC4FQ8N1N0 589 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 IL22RA1Q8N6P7 574 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR7G2Q8NG99 324 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 FGF11Q92914 225 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 FAM120BQ96EK7 910 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NANOGQ9H9S0 305 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C3orf14Q9HBI5 128 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NDE1Q9NXR1 346 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PTGFRNQ9P2B2 879 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GMEB1Q9Y692 573 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ATMQ13315 3056 aa15.26■□□□□ 0.03
CDK5RAP3-228ENST00000583363 LOC102723996A0A087X1L8 192 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C17orf105B2RV13 164 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms