RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 GAL3ST4Q96RP7 486 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 KCNA7Q96RP8 456 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 DEFB127Q9H1M4 99 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 IL1RL2Q9HB29 575 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 TNFRSF12AQ9NP84 129 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 SACM1LQ9NTJ5 587 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 MAT2BQ9NZL9 334 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 VPS29Q9UBQ0 182 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 DCDC2Q9UHG0 476 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 CNOT11Q9UKZ1 510 aaKnown RBP9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 HIVEP1P15822 2718 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 MPDZO75970 2070 aa9.75□□□□□ -0.85
SUPT4H1-204ENST00000580947 C2orf92A0A1B0GVN3 265 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 C19orf84I3L1E1 186 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 PRRG2O14669 202 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 CDC40O60508 579 aaKnown RBP eCLIP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 PLIN3O60664 434 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 ESRRBO95718 433 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 CBX7O95931 251 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 KRT6AP02538 564 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 KRT6BP04259 564 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 ENO1P06733 434 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 RFPL3SP0C7P2 107 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 PORP16435 677 aaPredicted RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 ENDOUP21128 410 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 GPX3P22352 226 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 HTR1EP28566 365 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 MAGEA5P43359 124 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 KRT6CP48668 564 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 PKNOX1P55347 436 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 TRA2BP62995 288 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 MAP4K2Q12851 820 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 SLC22A10Q63ZE4 541 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 GALNT18Q6P9A2 607 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 FAM111BQ6SJ93 734 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 TMEM64Q6YI46 380 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 FRMD7Q6ZUT3 714 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 FAM47EQ6ZV65 393 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 TRILQ7L0X0 811 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 SLC29A4Q7RTT9 530 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 SLC22A16Q86VW1 577 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 DND1Q8IYX4 353 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 LRRC25Q8N386 305 aaPredicted RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 FAM109AQ8N4B1 249 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 RPRMLQ8N4K4 120 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 GBP7Q8N8V2 638 aaPredicted RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 C17orf47Q8NEP4 570 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 METTL6Q8TCB7 284 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 EPS8L3Q8TE67 593 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 TRIM44Q96DX7 344 aaPredicted RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 APIPQ96GX9 242 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 OR10A5Q9H207 317 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 C12orf65Q9H3J6 166 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 ZNF703Q9H7S9 590 aaPredicted RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 SIRT5Q9NXA8 310 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 MCM8Q9UJA3 840 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 TIMM22Q9Y584 194 aa9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.74□□□□□ -0.85
SUPT4H1-204ENST00000580947 ANKRD33BA6NCL7 494 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 ACOT7O00154 380 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 HNRNPRO43390 633 aaKnown RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 GLRA3O75311 464 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 TRIM3O75382 744 aaPredicted RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 ULK1O75385 1050 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 PDE9AO76083 593 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 P04436 131 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 TPOP07202 933 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 CSNK2A2P19784 350 aaPredicted RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 CRHR1P34998 444 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 FEN1P39748 380 aaKnown RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 SLCO1A2P46721 670 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 SMSP52788 366 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 DNAJB13P59910 316 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 HMGCS1Q01581 520 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 SLC18A2Q05940 514 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 LTB4RQ15722 352 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 CEBPEQ15744 281 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 PRSS53Q2L4Q9 553 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 ZNF628Q5EBL2 1059 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 PRAMEF20Q5VT98 475 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 FNDC7Q5VTL7 733 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 FAM180BQ6P0A1 224 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 VWA5B2Q8N398 1253 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 OR7G1Q8NGA0 311 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 TREX2Q9BQ50 279 aaPredicted RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 NXF5Q9H1B4 397 aaKnown RBP9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 PPCSQ9HAB8 311 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 PNPLA3Q9NST1 481 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 NMRK1Q9NWW6 199 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 CNIH4Q9P003 139 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 STK38LQ9Y2H1 464 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 CCL27Q9Y4X3 112 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 NPFFR2Q9Y5X5 522 aa9.73□□□□□ -0.85
SUPT4H1-204ENST00000580947 ABCA4P78363 2273 aa9.72□□□□□ -0.85
SUPT4H1-204ENST00000580947 OR14I1A6ND48 311 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms