RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 RAB33BQ9H082 229 aa16.76■□□□□ 0.27
EIF4A1-216ENST00000580888 GLIPR2Q9H4G4 154 aa16.76■□□□□ 0.27
EIF4A1-216ENST00000580888 FOXJ2Q9P0K8 574 aa16.76■□□□□ 0.27
EIF4A1-216ENST00000580888 PCDHGA3Q9Y5H0 932 aa16.76■□□□□ 0.27
EIF4A1-216ENST00000580888 TENM4Q6N022 2769 aa16.76■□□□□ 0.27
EIF4A1-216ENST00000580888 SPTA1P02549 2419 aa16.76■□□□□ 0.27
EIF4A1-216ENST00000580888 LOC105369274A0A096LPK9 316 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 LOC102723532A0A0G2JNH3 316 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 A0A0J9YVX5 310 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 H0YGG7 62 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 DPM1O60762 260 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 NTRK1P04629 796 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 ZNF888P0CJ79 500 aaPredicted RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 ETFAP13804 333 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 CSF2RBP32927 897 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 ALDH9A1P49189 494 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 RAB8AP61006 207 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 ARF3P61204 181 aaPredicted RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 SNRPNP63162 240 aaKnown RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 BIRC2Q13490 618 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 MED21Q13503 144 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 MYBPC3Q14896 1274 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 TGIF1Q15583 401 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 ZNF630Q2M218 657 aaPredicted RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 IQCCQ4KMZ1 466 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 FRMPD2BQ6IN97 320 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 TMEM71Q6P5X7 295 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 KLHL35Q6PF15 583 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 PIWIL3Q7Z3Z3 882 aaKnown RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 OR4N4Q8N0Y3 316 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 GALNT4Q8N4A0 578 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 EXOSC8Q96B26 276 aaKnown RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 CCDC74BQ96LY2 380 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 ZNF681Q96N22 645 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 TRAPPC9Q96Q05 1148 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 MAPKAP1Q9BPZ7 522 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 OSBPL11Q9BXB4 747 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 CHRNA10Q9GZZ6 450 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 OAZ3Q9UMX2 235 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 FAF1Q9UNN5 650 aaPredicted RBP16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 AP4B1Q9Y6B7 739 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 BSNQ9UPA5 3926 aa16.75■□□□□ 0.27
EIF4A1-216ENST00000580888 NUP214P35658 2090 aaPredicted RBP16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 SAC3D1A6NKF1 404 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 PGRMC2O15173 223 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 UBXN7O94888 489 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 CCL4P13236 92 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 PVRP15151 417 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 CDK9P50750 372 aaKnown RBP16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 MAPK10P53779 464 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 PCBP3P57721 371 aaKnown RBP16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 PPP1CAP62136 330 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 BTN3A2P78410 334 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 BLMHQ13867 455 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 NHSL2Q5HYW2 709 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 CRB2Q5IJ48 1285 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 TMEM164Q5U3C3 297 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 TMEM214Q6NUQ4 689 aaKnown RBP16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 RNF130Q86XS8 419 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 CBR4Q8N4T8 237 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 SUN3Q8TAQ9 357 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 SFXN5Q8TD22 340 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 TAAR9Q96RI9 348 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 Q9H521 79 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 LYRM4Q9HD34 91 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 A4GALTQ9NPC4 353 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 IL1RAPQ9NPH3 570 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 C5AR2Q9P296 337 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 EPHA6Q9UF33 1036 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 PHF11Q9UIL8 331 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 UTS2RQ9UKP6 389 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 SLC22A7Q9Y694 548 aa16.74■□□□□ 0.27
EIF4A1-216ENST00000580888 RNF103-CHMP3A0A140T963 221 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 MAGEA13PA6NCF6 341 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 B4E171 279 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ALOX12P18054 663 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 CHI3L1P36222 383 aaPredicted RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 TSPAN7P41732 249 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 CRATP43155 626 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 CAPZBP47756 277 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 EPHA4P54764 986 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 TXNL4AP83876 142 aaKnown RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 RUNX2Q13950 521 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.73■□□□□ 0.271e-323■■■□□ 16.1
EIF4A1-216ENST00000580888 NKAIN2Q5VXU1 208 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 C18orf63Q68DL7 685 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ARMC6Q6NXE6 501 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 WDR74Q6RFH5 385 aaPredicted RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ABHD13Q7L211 337 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 C6orf120Q7Z4R8 191 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ZNF761Q86XN6 746 aaPredicted RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 CHERPQ8IWX8 916 aaKnown RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 DNAJC22Q8N4W6 341 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ZNF655Q8N720 491 aaPredicted RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 AGBL5Q8NDL9 886 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 RCBTB1Q8NDN9 531 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ZFP28Q8NHY6 868 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 CNRIP1Q96F85 164 aaPredicted RBP16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 ZNF285Q96NJ3 590 aa16.73■□□□□ 0.27
EIF4A1-216ENST00000580888 DDA1Q9BW61 102 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms