RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SLC19A2O60779 497 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 PEX11AO75192 247 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 BCAS2O75934 225 aaPredicted RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 RSL1D1O76021 490 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 LRATO95237 230 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 IGKV3-11P04433 115 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 ATP1B1P05026 303 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CHRNGP07510 517 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 FGF4P08620 206 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 DDX5P17844 614 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 MAPK1P28482 360 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 NTSP30990 170 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 PTGER1P34995 402 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GPC1P35052 558 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 KRT20P35900 424 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SERPINB5P36952 375 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GSTM5P46439 218 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SERPINB4P48594 390 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TMED10P49755 219 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 NCBP2P52298 156 aaKnown RBP eCLIP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 RPP38P78345 283 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 RAE1P78406 368 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF763Q0D2J5 394 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 MAP4K2Q12851 820 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 EXOSC7Q15024 291 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TOMM20Q15388 145 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CHI3L2Q15782 390 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TRMT12Q53H54 448 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 C1QL3Q5VWW1 255 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GALNT18Q6P9A2 607 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 FAM111BQ6SJ93 734 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 LRIG3Q6UXM1 1119 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM64Q6YI46 380 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 EXOC3L1Q86VI1 746 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 FJX1Q86VR8 437 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SLC22A16Q86VW1 577 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TICAM1Q8IUC6 712 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 DND1Q8IYX4 353 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GHDCQ8N2G8 530 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GOLGA6L1Q8N7Z2 621 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 ANKRD42Q8N9B4 389 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GOLM1Q8NBJ4 401 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TWIST2Q8WVJ9 160 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 DIO2Q92813 273 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 KAT2AQ92830 837 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 GFM2Q969S9 779 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TP53INP1Q96A56 240 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SPACA9Q96E40 222 aaPredicted RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CNRIP1Q96F85 164 aaPredicted RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 PGM2Q96G03 612 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 METTL2AQ96IZ6 378 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CCT7Q99832 543 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SLX1AQ9BQ83 275 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 FAM173AQ9BQD7 235 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 DEFB127Q9H1M4 99 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 LDAHQ9H6V9 325 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 EXO5Q9H790 373 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TNFRSF12AQ9NP84 129 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 NKIRAS1Q9NYS0 192 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TAS2R9Q9NYW1 312 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CNIH4Q9P003 139 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SH3BP4Q9P0V3 963 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 HEY2Q9UBP5 337 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SUCOQ9UBS9 1254 aaKnown RBP6.06□□□□□ -1.44
TRAF4-213ENST00000578917 PRODH2Q9UF12 536 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CES1P1Q9UKY3 287 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 DNAJC15Q9Y5T4 150 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 PTGDR2Q9Y5Y4 395 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 ATP6AP2A0A1C7CYW4 349 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 A1L4Q6 167 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ASPDHA6ND91 283 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 FAM166BA8MTA8 275 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM233B4DJY2 109 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PRRG2O14669 202 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PIP5K1BO14986 540 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 TYROBPO43914 113 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 HS6ST1O60243 411 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SKAP2O75563 359 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 REM1O75628 298 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ATP6AP2O75787 350 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ZWINTO95229 277 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SERPINE1P05121 402 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 JUNP05412 331 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 CT62P0C5K7 136 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PCSK2P16519 638 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 DDCP20711 480 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 GRK2P25098 689 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PTGS2P35354 604 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PIGAP37287 484 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ASMTP46597 345 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 MASP1P48740 699 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 FBXW4P57775 412 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 RPL38P63173 70 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 MRPS35P82673 323 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 FUT7Q11130 342 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 STX3Q13277 289 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SLC10A1Q14973 349 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 EBPQ15125 230 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 LTB4RQ15722 352 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 NNATQ16517 81 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms