RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 BTBD16Q32M84 506 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 FAM91A1Q658Y4 838 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 H3F3CQ6NXT2 135 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 KBTBD2Q8IY47 623 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 LGI4Q8N135 537 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 ZNF615Q8N8J6 731 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 OR7G2Q8NG99 324 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 NCLNQ969V3 563 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 ELP4Q96EB1 424 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 SENP5Q96HI0 755 aaPredicted RBP11.82□□□□□ -0.52
MKS1-206ENST00000577824 ING2Q9H160 280 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 ATP13A2Q9NQ11 1180 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 SERHLQ9NQF3 203 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
MKS1-206ENST00000577824 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.82□□□□□ -0.52
MKS1-206ENST00000577824 CCDC167Q9P0B6 97 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 COPS7AQ9UBW8 275 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 G3BP2Q9UN86 482 aaKnown RBP11.82□□□□□ -0.52
MKS1-206ENST00000577824 ERVK-19Q9WJR5 959 aa11.82□□□□□ -0.52
MKS1-206ENST00000577824 TPRP12270 2363 aaKnown RBP11.82□□□□□ -0.52
MKS1-206ENST00000577824 ARGFXA6NJG6 315 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 A8MUA0 341 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 C9JVG2 144 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 FCHO1O14526 889 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 PRAMEF2O60811 474 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 HOXB9P17482 250 aaPredicted RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 CAPN3P20807 821 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 SOX11P35716 441 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 MC3RP41968 323 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 CDK9P50750 372 aaKnown RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 CLCN2P51788 898 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 PGDP52209 483 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 DGKQP52824 942 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 MANFP55145 182 aaKnown RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 HBA1P69905 142 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 CXADRP78310 365 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 SF3A3Q12874 501 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■■■□ 19.8
MKS1-206ENST00000577824 HSPB3Q12988 150 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 EBPQ15125 230 aaKnown RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 DEFB109BQ30KR1 87 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 PGS1Q32NB8 556 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 TIGD2Q4W5G0 525 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 GKAP1Q5VSY0 366 aaPredicted RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 FAM111BQ6SJ93 734 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 ZNF551Q7Z340 670 aaPredicted RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 C9orf40Q8IXQ3 194 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 CLECL1Q8IZS7 167 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 ZNF321PQ8N8H1 164 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 ZNF441Q8N8Z8 693 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 C17orf47Q8NEP4 570 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 VPS37AQ8NEZ2 397 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 ADCY4Q8NFM4 1077 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 NUBPLQ8TB37 319 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 SFXN5Q8TD22 340 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 APOBEC4Q8WW27 367 aaKnown RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 PSMF1Q92530 271 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 HOXB13Q92826 284 aaPredicted RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 MOAP1Q96BY2 351 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 SPDL1Q96EA4 605 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 OR52E6Q96RD3 313 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 LHPPQ9H008 270 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 TAS2R9Q9NYW1 312 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 C19orf53Q9UNZ5 99 aaPredicted RBP11.81□□□□□ -0.52
MKS1-206ENST00000577824 ERVK-11Q9UQG0 969 aa11.81□□□□□ -0.52
MKS1-206ENST00000577824 A0A1W2PP18 115 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 TMEM200CA6NKL6 621 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 UPK1AO00322 258 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CFLARO15519 480 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 COQ9O75208 318 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 C6orf47O95873 294 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 CELA2AP08217 269 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 ZCCHC18P0CG32 403 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 ITGAMP11215 1152 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 TNNI3P19429 210 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 PTPN6P29350 595 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 SSTR4P31391 388 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 PTGER1P34995 402 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 EMDP50402 254 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 KCNK10P57789 538 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 KLF10Q13118 480 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 UBAP2LQ14157 1087 aaKnown RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 MYBPC3Q14896 1274 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 TLR1Q15399 786 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 AGKQ53H12 422 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 TRMT12Q53H54 448 aaKnown RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 COQ5Q5HYK3 327 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 EXOSC6Q5RKV6 272 aaKnown RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 BORAQ6PGQ7 559 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 TMEM107Q6UX40 140 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 HSDL2Q6YN16 418 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 RNF111Q6ZNA4 994 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 GK5Q6ZS86 529 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 MTDHQ86UE4 582 aaKnown RBP11.8□□□□□ -0.52
MKS1-206ENST00000577824 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 KIF2BQ8N4N8 673 aa11.8□□□□□ -0.52
MKS1-206ENST00000577824 GTF2H4Q92759 462 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms