RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 HRKO00198 91 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SCAMP2O15127 329 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 AKAP10O43572 662 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PRKNO60260 465 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 MAN1A2O60476 641 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 BCAS2O75934 225 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 F10P00742 488 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CT62P0C5K7 136 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CD46P15529 392 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 LBPP18428 481 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PRPS1L1P21108 318 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SSTR4P31391 388 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 NCBP2P52298 156 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■■■■□ 23.5
CDK5RAP3-203ENST00000577442 PDE7AQ13946 482 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 EBPQ15125 230 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 MPEG1Q2M385 716 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PLEKHN1Q494U1 663 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 OPN5Q6U736 354 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 C9orf40Q8IXQ3 194 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CCDC116Q8IYX3 515 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 TAGAPQ8N103 731 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SLC15A4Q8N697 577 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 Q8NA96 180 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 TMEM178AQ8NBL3 297 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 OR9A2Q8NGT5 310 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 GFM2Q969S9 779 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ZBED6CLQ96FA7 236 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 EGLN2Q96KS0 407 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PPP1R36Q96LQ0 422 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 WWTR1Q9GZV5 400 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 OR10A5Q9H207 317 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 AKTIPQ9H8T0 292 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ATAD3AQ9NVI7 634 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 HPF1Q9NWY4 346 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SH3BP4Q9P0V3 963 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 LUZP4Q9P127 313 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 LRFN1Q9P244 771 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PRODH2Q9UF12 536 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 BAIAP2L1Q9UHR4 511 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CSAG2Q9Y5P2 127 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SHANK1Q9Y566 2161 aa11.79□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ZGRF1Q86YA3 2104 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 LRRK2Q5S007 2527 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 C2orf92A0A1B0GVN3 265 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 TMEM200CA6NKL6 621 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 WWP2O00308 870 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SDHDO14521 159 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PLOD3O60568 738 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 SLC25A12O75746 678 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 OR2J2O76002 312 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 LRATO95237 230 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 IFI6P09912 130 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 KITP10721 976 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CD96P40200 585 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 DUSP2Q05923 314 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 MGAT2Q10469 447 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 PTGR1Q14914 329 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 LTB4RQ15722 352 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ZNF628Q5EBL2 1059 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ZNF766Q5HY98 468 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 OGFOD2Q6N063 350 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 RPUSD3Q6P087 351 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 FAM180BQ6P0A1 224 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 FAM111BQ6SJ93 734 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 DND1Q8IYX4 353 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CYP4Z2PQ8N1L4 340 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 NATD1Q8N6N6 113 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 MDS2Q8NDY4 140 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CATSPER1Q8NEC5 780 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 C17orf47Q8NEP4 570 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ADCY4Q8NFM4 1077 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CKAP2Q8WWK9 683 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 CTHRC1Q96CG8 243 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 MAGEB18Q96M61 343 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 RASL10BQ96S79 203 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 TIMMDC1Q9NPL8 285 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ACSS1Q9NUB1 689 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ANKRD10Q9NXR5 420 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 BCAP29Q9UHQ4 241 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ATP6V1HQ9UI12 483 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ZNF639Q9UID6 485 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 EXO1Q9UQ84 846 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 ERVK-11Q9UQG0 969 aa11.78□□□□□ -0.52
CDK5RAP3-203ENST00000577442 A0A087WV62 115 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CAPN14A8MX76 684 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 COQ9O75208 318 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CBX7O95931 251 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CLPSP04118 112 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 G6PDP11413 515 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 S1PR1P21453 382 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 TMED10P49755 219 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NRG3P56975 720 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 C21orf58P58505 322 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 DCAF7P61962 342 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PSPHP78330 225 aa11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MRPS35P82673 323 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-203ENST00000577442 TLE1Q04724 770 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms