RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 MFSD4BQ5TF39 518 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 HES3Q5TGS1 186 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 FAM111BQ6SJ93 734 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 CYP2R1Q6VVX0 501 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 OVCH1Q7RTY7 1134 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 SPATA24Q86W54 205 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 SPPL2CQ8IUH8 684 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 AQP12AQ8IXF9 295 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 GOLM1Q8NBJ4 401 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 C11orf65Q8NCR3 313 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 PLPP5Q8NEB5 264 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 MIPOL1Q8TD10 442 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 SLC26A7Q8TE54 656 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 RNF31Q96EP0 1072 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 TAAR9Q96RI9 348 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 TMEM38AQ9H6F2 299 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 GORASP2Q9H8Y8 452 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 CXorf21Q9HAI6 301 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 C14orf105Q9NVL8 296 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 MAT2BQ9NZL9 334 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 IFT80Q9P2H3 777 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-209ENST00000573474 RAPGEFL1Q9UHV5 662 aa12.81□□□□□ -0.36
CCDC40-209ENST00000573474 FAF1Q9UNN5 650 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-209ENST00000573474 EP300Q09472 2414 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 IGKV3D-11A0A0A0MRZ8 115 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 TCRBV3S1A0A5B6 114 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 OR2W5A6NFC9 320 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 CREG1O75629 220 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 PSMG1O95456 288 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ATP6V1G2O95670 118 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ALBP02768 609 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 IFNA16P05015 189 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 HMGN2P05204 90 aaKnown RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 C8BP07358 591 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 NUDT7P0C024 238 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ZGLP1P0C6A0 271 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 FTH1P19P0C7X4 201 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 JMJD7P0C870 316 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ZNF28P17035 718 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ITIH1P19827 911 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ATP6V1B2P21281 511 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 PCGF2P35227 344 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 SOX18P35713 384 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ETV5P41161 510 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 KHKP50053 298 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 POLE2P56282 527 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 DSTNP60981 165 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 MRPS35P82673 323 aaKnown RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 RHDQ02161 417 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ZNF630Q2M218 657 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 TRMT12Q53H54 448 aaKnown RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 MTX3Q5HYI7 312 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 TNFAIP8L2Q6P589 184 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 AAGABQ6PD74 315 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 SLC30A8Q8IWU4 369 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 GALNT12Q8IXK2 581 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 CACTIN-AS1Q8N1I8 211 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 HORMAD2Q8N7B1 307 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 OR52E4Q8NGH9 312 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 STT3BQ8TCJ2 826 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 FIG4Q92562 907 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 RIT1Q92963 219 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 FKBP10Q96AY3 582 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 CTHRC1Q96CG8 243 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 RSRC1Q96IZ7 334 aaKnown RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 NSMCE2Q96MF7 247 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ZNF578Q96N58 590 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-209ENST00000573474 MS4A4EQ96PG1 132 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 DDA1Q9BW61 102 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ASPSCR1Q9BZE9 553 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 ULBP3Q9BZM4 244 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 MKL2Q9ULH7 1088 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 B3GALT1Q9Y5Z6 326 aa12.8□□□□□ -0.36
CCDC40-209ENST00000573474 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 SPAARA0A1B0GVQ0 90 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 VSTM2BA6NLU5 285 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 PLD2O14939 933 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 KRT36O76013 467 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 RECKO95980 971 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 CT62P0C5K7 136 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 ARAFP10398 606 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 TNNI3P19429 210 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 ERFP50548 548 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
CCDC40-209ENST00000573474 NHLH1Q02575 133 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 EEF1A2Q05639 463 aaKnown RBP12.79□□□□□ -0.36
CCDC40-209ENST00000573474 LASP1Q14847 261 aaKnown RBP12.79□□□□□ -0.36
CCDC40-209ENST00000573474 GLIPR1L2Q4G1C9 344 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 FBXW10Q5XX13 1052 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 ZFP1Q6P2D0 407 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 DGAT2L6Q6ZPD8 337 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 VWA5B2Q8N398 1253 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 WDR36Q8NI36 951 aaKnown RBP12.79□□□□□ -0.36
CCDC40-209ENST00000573474 POP5Q969H6 163 aaKnown RBP12.79□□□□□ -0.36
CCDC40-209ENST00000573474 NCLNQ969V3 563 aa12.79□□□□□ -0.36
CCDC40-209ENST00000573474 PMEPA1Q969W9 287 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms