RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MMAAQ8IVH4 418 aaKnown RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 ADHFE1Q8IWW8 467 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 PIANPQ8IYJ0 282 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 UBALD2Q8IYN6 164 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 CENPLQ8N0S6 344 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 DEFB123Q8N688 67 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 CAMKVQ8NCB2 501 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 GPR26Q8NDV2 337 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 HUS1BQ8NHY5 278 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 PPP4R1Q8TF05 950 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 FAM3CQ92520 227 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 AP2M1Q96CW1 435 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 NUS1Q96E22 293 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 PDLIM5Q96HC4 596 aaKnown RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 GUCD1Q96NT3 240 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 BIRC8Q96P09 236 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 KLF6Q99612 283 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 OLFM1Q99784 485 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 SPATA16Q9BXB7 569 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 DERL2Q9GZP9 239 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 TFB2MQ9H5Q4 396 aaKnown RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 CAB39LQ9H9S4 337 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 HEBP1Q9NRV9 189 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 SLC17A7Q9P2U7 560 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 MMP17Q9ULZ9 603 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 ERVK-11Q9UQG0 969 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 WBP11Q9Y2W2 641 aaKnown RBP6.73□□□□□ -1.33
CNOT1-222ENST00000570139 TESMINQ9Y4I5 508 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 FADS3Q9Y5Q0 445 aa6.73□□□□□ -1.33
CNOT1-222ENST00000570139 PLXNB3Q9ULL4 1909 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 DPPA5A6NC42 116 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 FOXO6A8MYZ6 492 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 TCP11X1B4DZS4 312 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 MID1O15344 667 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 PLRG1O43660 514 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 VEGFDO43915 354 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 EDF1O60869 148 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 SMIM24O75264 130 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 EGFP01133 1207 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 SERPINE1P05121 402 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CCDC166P0CW27 439 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ATP1B2P14415 290 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 SRD5A1P18405 259 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 MSH3P20585 1137 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 DGKAP23743 735 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 NUDT1P36639 197 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CDKN2DP55273 166 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 DNAJB13P59910 316 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 RPS14P62263 151 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 RPS21P63220 83 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CNTN1Q12860 1018 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 NFE2L1Q14494 772 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 PTPRCAPQ14761 206 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CHRNA6Q15825 494 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 SMU1Q2TAY7 513 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ATP13A5Q4VNC0 1218 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF789Q5FWF6 425 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 TECRLQ5HYJ1 363 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 PIP5KL1Q5T9C9 394 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 METTL2BQ6P1Q9 378 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 FBXO42Q6P3S6 717 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ZYG11AQ6WRX3 759 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CDHR3Q6ZTQ4 885 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 PIWIL4Q7Z3Z4 852 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 HSD11B1LQ7Z5J1 315 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ADAMTSL2Q86TH1 951 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ZDHHC23Q8IYP9 409 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 OR14L1PQ8NHC6 308 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 STAG3L4Q8TBR4 150 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 TRPC4APQ8TEL6 797 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 KCNE4Q8WWG9 221 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF75CPQ92670 426 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 INPP5DQ92835 1189 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 PTP4A1Q93096 173 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 GLYATL1Q969I3 302 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 SLC41A2Q96JW4 573 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CCT8L2Q96SF2 557 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CDRT15Q96T59 188 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ACOX2Q99424 681 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 NDNQ99608 321 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 FAM110AQ9BQ89 295 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 TRMOQ9BU70 441 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 PITPNM3Q9BZ71 974 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 MMADHCQ9H3L0 296 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF304Q9HCX3 659 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 COQ3Q9NZJ6 369 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 TMEM216Q9P0N5 145 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 WNT16Q9UBV4 365 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 EMCNQ9ULC0 261 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 RUVBL2Q9Y230 463 aaKnown RBP6.72□□□□□ -1.33
CNOT1-222ENST00000570139 LIPT1Q9Y234 373 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 STK38LQ9Y2H1 464 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 DHRS7Q9Y394 339 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 A3GALT2U3KPV4 340 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 LAMA3Q16787 3333 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 CDH23Q9H251 3354 aa6.72□□□□□ -1.33
CNOT1-222ENST00000570139 SLCO1B7G3V0H7 640 aa6.71□□□□□ -1.34
CNOT1-222ENST00000570139 KERAO60938 352 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms