RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 VPS37BQ9H9H4 285 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 UPF2Q9HAU5 1272 aaKnown RBP2.98□□□□□ -1.93
CNOT1-221ENST00000569924 SGK2Q9HBY8 427 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 TM9SF3Q9HD45 589 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 Q9N2K0 584 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 PALMDQ9NP74 551 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 PRSS16Q9NQE7 514 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 THSD1Q9NS62 852 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 FAM49BQ9NUQ9 324 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.98□□□□□ -1.93
CNOT1-221ENST00000569924 NPAP1Q9NZP6 1156 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 SERGEFQ9UGK8 458 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 HMGXB4Q9UGU5 601 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 STOML2Q9UJZ1 356 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 FBXL2Q9UKC9 423 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 AGO1Q9UL18 857 aaKnown RBP2.98□□□□□ -1.93
CNOT1-221ENST00000569924 SCML1Q9UN30 329 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 CDC14AQ9UNH5 594 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 PLA2G4CQ9UP65 541 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.98□□□□□ -1.93
CNOT1-221ENST00000569924 RAI2Q9Y5P3 530 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 SLCO1B1Q9Y6L6 691 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 C2CD3Q4AC94 2353 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 TMEM131Q92545 1883 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 SHROOM3Q8TF72 1996 aa2.98□□□□□ -1.93
CNOT1-221ENST00000569924 NAV3Q8IVL0 2385 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ARID1BQ8NFD5 2236 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 A0A087X0K7 114 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 TRAV24A0A0B4J272 114 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 A0A1B0GTQ1 180 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 GAGE12JA6NER3 117 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ANKDD1BA6NHY2 528 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 J3KR12 359 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 E2F3O00716 465 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SOCS6O14544 535 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RRP8O43159 456 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 KLRC4O43908 158 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ZIC3O60481 467 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ATP6AP2O75787 350 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SEMA4FO95754 770 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 HLA-DRAP01903 254 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 NR3C1P04150 777 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 IGHV4-34P06331 123 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 HMBSP08397 361 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 NHLRC4P0CG21 123 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SMIM18P0DKX4 95 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 THRBP10828 461 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 PLA2G2AP14555 144 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ELAVL4P26378 380 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 HLA-FP30511 346 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 GTF2H1P32780 548 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 STX2P32856 288 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RPL21P46778 160 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 OR3A1P47881 315 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SLC6A12P48065 614 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 MMP15P51511 669 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 NUDT6P53370 316 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 CLDN20P56880 219 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 C21orf59P57076 290 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SLC8A3P57103 927 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 YWHAGP61981 247 aaKnown RBP eCLIP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RPS14P62263 151 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RUNX1T1Q06455 604 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 CRYZQ08257 329 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 PNRC1Q12796 327 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ILF2Q12905 390 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ILKQ13418 452 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 VEZF1Q14119 521 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 STK38Q15208 465 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ZKSCAN8Q15776 578 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 NPTX1Q15818 432 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 MPPE1Q53F39 396 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RAB6CQ53S08 254 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 BOLA3Q53S33 107 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SYT14P1Q58G82 188 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 C1orf220Q5T0J3 134 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ATAD3BQ5T9A4 648 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 GRTP1Q5TC63 336 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 AGAP6Q5VW22 663 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 FAM46CQ5VWP2 391 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ZNF776Q68DI1 518 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ARHGAP17Q68EM7 881 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 PM20D1Q6GTS8 502 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SPOPLQ6IQ16 392 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 FAM166AQ6J272 317 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 SHC4Q6S5L8 630 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 AMIGO1Q86WK6 493 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 COMMD2Q86X83 199 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 MARCH9Q86YJ5 346 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 LAX1Q8IWV1 398 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ARHGAP24Q8N264 748 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RYBPQ8N488 228 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 C1orf52Q8N6N3 182 aaKnown RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 BMPERQ8N8U9 685 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 ZNF557Q8N988 423 aaPredicted RBP2.97□□□□□ -1.93
CNOT1-221ENST00000569924 RASGEF1AQ8N9B8 481 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 FAM71CQ8NEG0 241 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 OR56B1Q8NGI3 324 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 OR52K2Q8NGK3 314 aa2.97□□□□□ -1.93
CNOT1-221ENST00000569924 OR52M1Q8NGK5 317 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms