RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HNF1AP20823 631 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF10P21506 573 aaPredicted RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 SPRP35270 261 aaPredicted RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 SCTRP47872 440 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 MASP1P48740 699 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 CLCN7P51798 805 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 RAB38P57729 211 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 DSCR9P59020 149 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 GPX6P59796 221 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 STXBP1P61764 594 aaKnown RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 SRYQ05066 204 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 CTBP1Q13363 440 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 FASTKD3Q14CZ7 662 aaKnown RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 GRTP1Q5TC63 336 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 ANKRD34AQ69YU3 496 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 EMBQ6PCB8 327 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF474Q6S9Z5 364 aaPredicted RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 CLNKQ7Z7G1 428 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 ADGRE4PQ86SQ3 457 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 CNEP1R1Q8N9A8 125 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 AKAP1Q92667 903 aaKnown RBP eCLIP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 KLHL4Q9C0H6 718 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 UBQLN3Q9H347 655 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 C12orf65Q9H3J6 166 aaKnown RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 ANKZF1Q9H8Y5 726 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 PPCSQ9HAB8 311 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 PLAC1Q9HBJ0 212 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 PTBP2Q9UKA9 531 aaKnown RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 RAB21Q9UL25 225 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 LIPT1Q9Y234 373 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 A0A087WUV0 522 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 MYOCOSA0A1B0GUC4 107 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM234BA2RU67 622 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 GOLGA8KD6RF30 607 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 GOLGA8TH3BQL2 631 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 DLX3O60479 287 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 HAUS5O94927 633 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 HIST1H2AGP0C0S8 130 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 PYGBP11216 843 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 COX7A2P14406 83 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 HIST1H2ADP20671 130 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 SAT1P21673 171 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 GMPRP36959 345 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 CDKN1AP38936 164 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC1A2P43004 574 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC6A12P48065 614 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 RPP38P78345 283 aaKnown RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 LOXL1Q08397 574 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 RBBP5Q15291 538 aaKnown RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 NTRK2Q16620 822 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 ERCC6LQ2NKX8 1250 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 TOR1AIP1Q5JTV8 583 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 DCST1Q5T197 706 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 LGSNQ5TDP6 509 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 LRRC8EQ6NSJ5 796 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM45BPQ6NSW5 357 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 ADAM5Q6NVV9 412 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 TRMT10BQ6PF06 316 aaKnown RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 PLXDC2Q6UX71 529 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 CHMP1BQ7LBR1 199 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 P4HA3Q7Z4N8 544 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 CCDC91Q7Z6B0 441 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 GRAMD2AQ8IUY3 354 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 DENND6AQ8IWF6 608 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 RFLNBQ8N5W9 214 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 ARIH2OSQ8N7S6 290 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 C3orf56Q8N813 242 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM47BQ8NA70 645 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM45AQ8TCE6 357 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF721Q8TF20 911 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 SMAP2Q8WU79 429 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 KCNJ9Q92806 393 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 PYCR2Q96C36 320 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 PLPPR2Q96GM1 343 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 SENP5Q96HI0 755 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 VPS39Q96JC1 886 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 HIST1H2AHQ96KK5 128 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 HIST1H2AJQ99878 128 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 TMEM204Q9BSN7 226 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 H2AFJQ9BTM1 129 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 TXLNGYQ9BZA5 131 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 CDC42EP4Q9H3Q1 356 aaKnown RBP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 RHOJQ9H4E5 214 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 ACSS3Q9H6R3 686 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 PARVBQ9HBI1 364 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 TAS2R13Q9NYV9 303 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 NINJ2Q9NZG7 142 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 C15orf41Q9Y2V0 281 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 VWA7Q9Y334 891 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 DHRS7Q9Y394 339 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 NOTCH1P46531 2555 aa8.2□□□□□ -1.1
VPS9D1-205ENST00000565452 CYR61O00622 381 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 SSX4O60224 188 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 CDH16O75309 829 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 LRATO95237 230 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms