RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 VPS37AQ8NEZ2 397 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 OR7A2PQ8NGA2 310 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 PTPMT1Q8WUK0 201 aaPredicted RBP24.17■■□□□ 1.46
NME3-208ENST00000565379 ERP27Q96DN0 273 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 FAM107BQ9H098 131 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 ZNF160Q9HCG1 818 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 G3BP2Q9UN86 482 aaKnown RBP24.17■■□□□ 1.46
NME3-208ENST00000565379 IGHV3-20A0A0C4DH32 117 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 SEC24DO94855 1032 aaPredicted RBP24.16■■□□□ 1.46
NME3-208ENST00000565379 IL6P05231 212 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 NT5EP21589 574 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 KIR3DL1P43629 444 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 SLC26A5P58743 744 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 UFM1P61960 85 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 LRRC74AQ0VAA2 488 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 MLC1Q15049 377 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 ANXA8L1Q5VT79 327 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 CCDC116Q8IYX3 515 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 B3GNT7Q8NFL0 401 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 ZNF675Q8TD23 568 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 MARK4Q96L34 752 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 DUSP26Q9BV47 211 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 CXorf21Q9HAI6 301 aa24.16■■□□□ 1.46
NME3-208ENST00000565379 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.16■■□□□ 1.462e-11■■■■■ 42.6
NME3-208ENST00000565379 COPG1Q9Y678 874 aaKnown RBP24.16■■□□□ 1.46
NME3-208ENST00000565379 SCN2AQ99250 2005 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 A8MUA0 341 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 LAMP1P11279 417 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 NCBP2P52298 156 aaKnown RBP eCLIP24.15■■□□□ 1.465e-6■■□□□ 11.5
NME3-208ENST00000565379 SOX8P57073 446 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 MAP4K2Q12851 820 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 ANKRD26P1Q6NSI1 321 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 JMJD6Q6NYC1 403 aaPredicted RBP24.15■■□□□ 1.46
NME3-208ENST00000565379 KBTBD2Q8IY47 623 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 CPSF7Q8N684 471 aaKnown RBP24.15■■□□□ 1.46
NME3-208ENST00000565379 NFAM1Q8NET5 270 aaPredicted RBP24.15■■□□□ 1.46
NME3-208ENST00000565379 PPWD1Q96BP3 646 aaKnown RBP24.15■■□□□ 1.46
NME3-208ENST00000565379 FBXL20Q96IG2 436 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 MMP25Q9NPA2 562 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 COPS7AQ9UBW8 275 aa24.15■■□□□ 1.46
NME3-208ENST00000565379 BCAS2O75934 225 aaPredicted RBP24.14■■□□□ 1.45
NME3-208ENST00000565379 SERPINA7P05543 415 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 GP1BBP13224 206 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 GPX3P22352 226 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 S100A3P33764 101 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 CD97P48960 835 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 MANFP55145 182 aaKnown RBP24.14■■□□□ 1.45
NME3-208ENST00000565379 NME5P56597 212 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 BTBD16Q32M84 506 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 ZNF750Q32MQ0 723 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 PGS1Q32NB8 556 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 ZNF385BQ569K4 471 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 FAM26EQ8N5C1 309 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 RBMXL3Q8N7X1 1067 aaKnown RBP24.14■■□□□ 1.45
NME3-208ENST00000565379 OR7G1Q8NGA0 311 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 OR1N1Q8NGS0 311 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 SUN3Q8TAQ9 357 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 VMP1Q96GC9 406 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 AMDHD1Q96NU7 426 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 GPR83Q9NYM4 423 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 SHANK1Q9Y566 2161 aa24.14■■□□□ 1.45
NME3-208ENST00000565379 MYOCOSA0A1B0GUC4 107 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 FAM234BA2RU67 622 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 RNASET2O00584 256 aaKnown RBP24.13■■□□□ 1.45
NME3-208ENST00000565379 SORBS2O94875 1100 aaKnown RBP24.13■■□□□ 1.45
NME3-208ENST00000565379 FAM107AO95990 144 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 ADSLP30566 484 aaPredicted RBP24.13■■□□□ 1.45
NME3-208ENST00000565379 UQCRFS1P47985 274 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 CLCN2P51788 898 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 PRSS53Q2L4Q9 553 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 PRICKLE4Q2TBC4 344 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 IRAK1BP1Q5VVH5 260 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 PIGWQ7Z7B1 504 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 ATCAYQ86WG3 371 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 VWA5B2Q8N398 1253 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 Q8NA96 180 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 SLC2A12Q8TD20 617 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 OR5P2Q8WZ92 322 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 SENP5Q96HI0 755 aaPredicted RBP24.13■■□□□ 1.45
NME3-208ENST00000565379 CCT8L2Q96SF2 557 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 GLIPR2Q9H4G4 154 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 ZNF385DQ9H6B1 395 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 FAM120CQ9NX05 1096 aaKnown RBP24.13■■□□□ 1.45
NME3-208ENST00000565379 ZNF451Q9Y4E5 1061 aa24.13■■□□□ 1.45
NME3-208ENST00000565379 A0A1W2PRB8 838 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 A0A1W2PS29 197 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 DYTNA2CJ06 578 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 TTLL8A6PVC2 850 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 CCDC22O60826 627 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 DDAH2O95865 285 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 GPR143P51810 404 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 POLR2JP52435 117 aaKnown RBP24.12■■□□□ 1.45
NME3-208ENST00000565379 FUT7Q11130 342 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 ZNF267Q14586 743 aaPredicted RBP24.12■■□□□ 1.45
NME3-208ENST00000565379 MPEG1Q2M385 716 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 FAM174BQ3ZCQ3 159 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 FAM180BQ6P0A1 224 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 PAOXQ6QHF9 649 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 MSANTD1Q6ZTZ1 278 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 OR8K3Q8NH51 312 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms